RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 TFDP1Q14186 410 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 DHX8Q14562 1220 aaKnown RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 AMHR2Q16671 573 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 ODR4Q5SWX8 454 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 SHC4Q6S5L8 630 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 SLC24A5Q71RS6 500 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 CATSPER4Q7RTX7 472 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 RAD54LQ92698 747 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 YME1L1Q96TA2 773 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 INO80BQ9C086 356 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 AGPAT5Q9NUQ2 364 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 RNF19AQ9NV58 838 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 PCDHA7Q9UN72 937 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 PIN4Q9Y237 131 aaKnown RBP10.74□□□□□ -0.69
HDAC3-208ENST00000476739 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 INSL6Q9Y581 213 aa10.74□□□□□ -0.69
HDAC3-208ENST00000476739 MYO9BQ13459 2157 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 FNDC1Q4ZHG4 1894 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-208ENST00000476739 TMEM265A0A087WTH1 108 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 MEIS3P2A8K0S8 358 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 SLC26A4O43511 780 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 TSPAN1O60635 241 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 FGFR1P11362 822 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 LONRF3Q496Y0 759 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
HDAC3-208ENST00000476739 UBXN11Q5T124 520 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 CDCA2Q69YH5 1023 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-208ENST00000476739 CDR2LQ86X02 465 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-208ENST00000476739 ECHDC2Q86YB7 292 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 NPAS4Q8IUM7 802 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 RASSF8Q8NHQ8 419 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 MYLIPQ8WY64 445 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 CPB2Q96IY4 423 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 NFKBIZQ9BYH8 718 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 PRDM12Q9H4Q4 367 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 RCOR1Q9UKL0 485 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 MTUS1Q9ULD2 1270 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
HDAC3-208ENST00000476739 A0A0U1RQF3 1178 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 CUTAO60888 179 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ARF4P18085 180 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 LIG1P18858 919 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 NAMPTP43490 491 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 NPTX2P47972 431 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 PEX3P56589 373 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ADGRE1Q14246 886 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ATL3Q6DD88 541 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 TWF2Q6IBS0 349 aaKnown RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ZNF598Q86UK7 904 aaKnown RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 GPBP1Q86WP2 473 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 KCTD17Q8N5Z5 321 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 PDILTQ8N807 584 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 RNF169Q8NCN4 708 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ARNTL2Q8WYA1 636 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 LARP4BQ92615 738 aaKnown RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 KIFAP3Q92845 792 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 LPPQ93052 612 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 EIF2AQ9BY44 585 aaKnown RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 FZD8Q9H461 694 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 ELAC1Q9H777 363 aaKnown RBP10.72□□□□□ -0.69
HDAC3-208ENST00000476739 FAM105AQ9NUU6 356 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 TMEM161AQ9NX61 479 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 CFAP45Q9UL16 551 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 MYH11P35749 1972 aa10.72□□□□□ -0.69
HDAC3-208ENST00000476739 CCDC169A6NNP5 214 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 TBKBP1A7MCY6 615 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 LPXNO60711 386 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 ERLIN2O94905 339 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 STAG3L1P0CL83 205 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
HDAC3-208ENST00000476739 ERVK-21P61565 698 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 GIT2Q14161 759 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 BTG3Q14201 252 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-208ENST00000476739 E2F4Q16254 413 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 CLLU1OSQ5K130 101 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 RRAGBQ5VZM2 374 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 TAS1R3Q7RTX0 852 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 NLRC5Q86WI3 1866 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 SMG8Q8ND04 991 aaKnown RBP10.71□□□□□ -0.69
HDAC3-208ENST00000476739 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 LEO1Q8WVC0 666 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-208ENST00000476739 STAMQ92783 540 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 REEP2Q9BRK0 252 aa10.71□□□□□ -0.69
HDAC3-208ENST00000476739 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms