RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PRPF3O43395 683 aaKnown RBP23.01■■□□□ 1.27
VPS36-203ENST00000475375 GALTP07902 379 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 CPA1P15085 419 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 KLRC2P26717 231 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 TARBP2Q15633 366 aaKnown RBP23.01■■□□□ 1.27
VPS36-203ENST00000475375 TSGA10IPQ3SY00 556 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 CATSPER4Q7RTX7 472 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 RHPN2Q8IUC4 686 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 FEZF2Q8TBJ5 459 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 SLC5A5Q92911 643 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 SH2D3AQ9BRG2 576 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 EMILIN2Q9BXX0 1053 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 FAM105AQ9NUU6 356 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 SUCLA2Q9P2R7 463 aaPredicted RBP23.01■■□□□ 1.27
VPS36-203ENST00000475375 DNAJB4Q9UDY4 337 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 DMDP11532 3685 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 MEIS3P2A8K0S8 358 aa23■■□□□ 1.27
VPS36-203ENST00000475375 SLC11A1P49279 550 aa23■■□□□ 1.27
VPS36-203ENST00000475375 RAB27AP51159 221 aa23■■□□□ 1.27
VPS36-203ENST00000475375 PTPN14Q15678 1187 aa23■■□□□ 1.27
VPS36-203ENST00000475375 XKR3Q5GH77 459 aa23■■□□□ 1.27
VPS36-203ENST00000475375 Q6ZUG5 572 aa23■■□□□ 1.27
VPS36-203ENST00000475375 GPR149Q86SP6 731 aa23■■□□□ 1.27
VPS36-203ENST00000475375 URGCPQ8TCY9 931 aa23■■□□□ 1.27
VPS36-203ENST00000475375 BRF1Q92994 677 aa23■■□□□ 1.27
VPS36-203ENST00000475375 NLRP4Q96MN2 994 aa23■■□□□ 1.27
VPS36-203ENST00000475375 TRAIPQ9BWF2 469 aa23■■□□□ 1.27
VPS36-203ENST00000475375 DDX11L8A8MPP1 907 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 TDGQ13569 410 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 CWF19L1Q69YN2 538 aaKnown RBP22.99■■□□□ 1.27
VPS36-203ENST00000475375 ZNF410Q86VK4 478 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 ADSSL1Q8N142 457 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 SLC26A6Q9BXS9 759 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 NIFKQ9BYG3 293 aaKnown RBP22.99■■□□□ 1.27
VPS36-203ENST00000475375 VPS54Q9P1Q0 977 aa22.99■■□□□ 1.27
VPS36-203ENST00000475375 WDR81Q562E7 1941 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 OFD1O75665 1012 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 USP11P51784 963 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 ZNF280BQ86YH2 543 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 SIX5Q8N196 739 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 RDM1Q8NG50 284 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 PGBD4Q96DM1 585 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 VN1R3Q9BXE9 311 aa22.98■■□□□ 1.27
VPS36-203ENST00000475375 STK25O00506 426 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 PI15O43692 258 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 AOC1P19801 751 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 CLCN4P51793 760 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 NLRP5P59047 1200 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 BMP2KLQ5H9B9 411 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 KSR1Q8IVT5 923 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 KLHL5Q96PQ7 755 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 FAM193BQ96PV7 902 aaPredicted RBP22.97■■□□□ 1.27
VPS36-203ENST00000475375 KCNK12Q9HB15 430 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 STK39Q9UEW8 545 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 PCDHB2Q9Y5E7 798 aa22.97■■□□□ 1.27
VPS36-203ENST00000475375 ZNF623O75123 536 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 PSMD10O75832 226 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 CNPP09543 421 aaKnown RBP22.96■■□□□ 1.27
VPS36-203ENST00000475375 RFX1P22670 979 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 CCDC105Q8IYK2 499 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 TBCKQ8TEA7 893 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 JAKMIP1Q96N16 626 aaKnown RBP22.96■■□□□ 1.27
VPS36-203ENST00000475375 MRPL17Q9NRX2 175 aaKnown RBP22.96■■□□□ 1.27
VPS36-203ENST00000475375 DUSP12Q9UNI6 340 aa22.96■■□□□ 1.27
VPS36-203ENST00000475375 IGKV6-21A0A0C4DH24 114 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 C2CD2LO14523 706 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 EDIL3O43854 480 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 B4GALT3O60512 393 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 MAFO75444 373 aaPredicted RBP22.95■■□□□ 1.26
VPS36-203ENST00000475375 NPR3P17342 541 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 ANGPT1Q15389 498 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 LETM2Q2VYF4 491 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 CEP89Q96ST8 783 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 RTP3Q9BQQ7 232 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 JPH2Q9BR39 696 aaPredicted RBP22.95■■□□□ 1.26
VPS36-203ENST00000475375 RNF26Q9BY78 433 aaPredicted RBP22.95■■□□□ 1.26
VPS36-203ENST00000475375 FAN1Q9Y2M0 1017 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 WDR87Q6ZQQ6 2873 aa22.95■■□□□ 1.26
VPS36-203ENST00000475375 TDP2O95551 362 aa22.94■■□□□ 1.26
VPS36-203ENST00000475375 ALDH2P05091 517 aa22.94■■□□□ 1.26
VPS36-203ENST00000475375 BLOC1S2Q6QNY1 142 aa22.94■■□□□ 1.26
VPS36-203ENST00000475375 DTWD2Q8NBA8 298 aa22.94■■□□□ 1.26
VPS36-203ENST00000475375 RSAD1Q9HA92 442 aa22.94■■□□□ 1.26
VPS36-203ENST00000475375 NID2Q14112 1375 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 DDHD2O94830 711 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 STBD1O95210 358 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 URODP06132 367 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 GBP2P32456 591 aaPredicted RBP22.93■■□□□ 1.26
VPS36-203ENST00000475375 ID4P47928 161 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 AK2P54819 239 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 Q4G0T1 1027 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 PLA2G4FQ68DD2 849 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 AGMOQ6ZNB7 445 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 C15orf39Q6ZRI6 1047 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 KCNG4Q8TDN1 519 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 C22orf23Q9BZE7 217 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 MAN1C1Q9NR34 630 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 AGPAT5Q9NUQ2 364 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 IGSF9Q9P2J2 1179 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 KANSL3Q9P2N6 904 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms