RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 LAD1O00515 517 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 P4HBP07237 508 aaKnown RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 TOB1P50616 345 aaPredicted RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 NBR1Q14596 966 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 LONRF3Q496Y0 759 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 CLLU1OSQ5K130 101 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 THNSL1Q8IYQ7 743 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
CLIP2-204ENST00000474962 RAB34Q9BZG1 259 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 CYP26B1Q9NR63 512 aa13.21□□□□□ -0.29
CLIP2-204ENST00000474962 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 WNT7AO00755 349 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 MBTPS2O43462 519 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 EOMESO95936 686 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 NDUFV1P49821 464 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 ZP2Q05996 745 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 PTGDRQ13258 359 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 EPHA7Q15375 998 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 KCNT2Q6UVM3 1135 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 ABI1Q8IZP0 508 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 DYDC2Q96IM9 177 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 TLR9Q9NR96 1032 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 FAM50BQ9Y247 325 aa13.2□□□□□ -0.3
CLIP2-204ENST00000474962 FNDC1Q4ZHG4 1894 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-204ENST00000474962 A0A087WWV3 80 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 HOXA2O43364 376 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 GPR37L1O60883 481 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 SLITRK3O94933 977 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 BRD1O95696 1058 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 GLP2RO95838 553 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 LAG3P18627 525 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 PHKA2P46019 1235 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 UBE3AQ05086 875 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 PKP1Q13835 747 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
CLIP2-204ENST00000474962 TMEM31Q5JXX7 168 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 FAM173BQ6P4H8 233 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-204ENST00000474962 TPH2Q8IWU9 490 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 VN1R2Q8NFZ6 395 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 LPPQ93052 612 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-204ENST00000474962 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
CLIP2-204ENST00000474962 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-204ENST00000474962 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-204ENST00000474962 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 NT5C1B-RDH14C9J2C7 533 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 FSCN2O14926 492 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 EYA4O95677 639 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 YWHABP31946 246 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 TECP42680 631 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 STK38Q15208 465 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 CSPP1Q1MSJ5 1256 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 PLPP4Q5VZY2 271 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 ZNF410Q86VK4 478 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 SLC7A3Q8WY07 619 aa13.18□□□□□ -0.3
CLIP2-204ENST00000474962 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
CLIP2-204ENST00000474962 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms