RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZNF790Q6PG37 636 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ANKS1BQ7Z6G8 1248 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 METTL13Q8N6R0 699 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PIGOQ8TEQ8 1089 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 P2RX5Q93086 422 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 NLRP4Q96MN2 994 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SERPINB12Q96P63 405 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 IWS1Q96ST2 819 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 NDNQ99608 321 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 HNRNPABQ99729 332 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CLSTN3Q9BQT9 956 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 WDR83Q9BRX9 315 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 TUBGCP2Q9BSJ2 902 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CRACR2AQ9BSW2 395 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TRIM7Q9C029 511 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ZNF696Q9H7X3 374 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 EPB41L5Q9HCM4 733 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PREBQ9HCU5 417 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TCP11L1Q9NUJ3 509 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ZNHIT6Q9NWK9 470 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 MKS1Q9NXB0 559 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 ZNF106Q9H2Y7 1883 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 ZNF532Q9HCE3 1301 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 GOLGA6L7A0A1B0GV03 622 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PVALEFA0A1B0GWK0 134 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ERVV-2B6SEH9 535 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ZNF701M0R085 212 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 GPR25O00155 361 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 C2CD2LO14523 706 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TGDSO95455 350 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ALOX15P16050 662 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 SERPINB8P50452 374 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 IFI35P80217 286 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 OS9Q13438 667 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CAMK2BQ13554 666 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PFKFB3Q16875 520 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CERKLQ49MI3 558 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 GUF1Q8N442 669 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 OR2W6PQ8NHA6 318 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 MAIP1Q8WWC4 291 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 DACH2Q96NX9 599 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 FIZ1Q96SL8 496 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SORT1Q99523 831 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PSD2Q9BQI7 771 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CORO1BQ9BR76 489 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CADM1Q9BY67 442 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 BHMT2Q9H2M3 363 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 LRRC19Q9H756 370 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ECT2Q9H8V3 914 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TAB2Q9NYJ8 693 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ARL2BPQ9Y2Y0 163 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TELO2Q9Y4R8 837 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TIMM22Q9Y584 194 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.72e-7■■■■■ 53.5
USP16-205ENST00000474835 ANKRD36A6QL64 1941 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GPAA1O43292 621 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 HNRNPCL1O60812 293 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 ATP5HO75947 161 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ECM2O94769 699 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 IDEP14735 1019 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 EIF2S2P20042 333 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 YY1P25490 414 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ACVR2AP27037 513 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CYLC1P35663 651 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 EIF4A3P38919 411 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 PSMD8P48556 350 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 POLGP54098 1239 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 RRP1BQ14684 758 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 LRRC24Q50LG9 513 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SLC45A4Q5BKX6 768 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 HHATQ5VTY9 493 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 RUFY4Q6ZNE9 571 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GADL1Q6ZQY3 521 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CCDC121Q6ZUS5 278 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ACAD11Q709F0 780 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 CYFIP1Q7L576 1253 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PHKBQ93100 1093 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 GRAMD1AQ96CP6 724 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 ZNF212Q9UDV6 495 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 TRIM33Q9UPN9 1127 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SMG5Q9UPR3 1016 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 LUC7L2Q9Y383 392 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 TTLL3Q9Y4R7 772 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 SYNGAP1Q96PV0 1343 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 LRRC53A6NM62 1247 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 RNASEH1O60930 286 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 ZPR1O75312 459 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 PALMO75781 387 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 LYNP07948 512 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 RARBP10826 455 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 HARSP12081 509 aaKnown RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 ITGA4P13612 1032 aa4.44□□□□□ -1.7
USP16-205ENST00000474835 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
USP16-205ENST00000474835 PHKG2P15735 406 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms