RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LARSQ9P2J5 1176 aaKnown RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 BRCA2P51587 3418 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 A0A087WZ62 844 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 SYCE3A1L190 88 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 CCDC169A6NNP5 214 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 PQBP1O60828 265 aaKnown RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 CHRNA1P02708 482 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 MYBP10242 640 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 HOXD13P35453 343 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 NLRP12P59046 1061 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 PTENP60484 403 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 GTF2BQ00403 316 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 CDC42EP1Q00587 391 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 MGAT3Q09327 533 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 PPP2R5AQ15172 486 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 FAM26DQ5JW98 314 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 CDCA2Q69YH5 1023 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 TAS1R3Q7RTX0 852 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 HAUS6Q7Z4H7 955 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 FAM178BQ8IXR5 827 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 SMYD4Q8IYR2 804 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 RNF149Q8NC42 400 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF507Q8TCN5 953 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 SCFD1Q8WVM8 642 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 CCDC47Q96A33 483 aaKnown RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 FDXACB1Q9BRP7 624 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 MRPL44Q9H9J2 332 aaKnown RBP11.04□□□□□ -0.64
COL8A1-206ENST00000474648 KMT5AQ9NQR1 393 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 ARHGAP28Q9P2N2 729 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 KCNG1Q9UIX4 513 aa11.04□□□□□ -0.64
COL8A1-206ENST00000474648 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
COL8A1-206ENST00000474648 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 THPOP40225 353 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 PRCPP42785 496 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-206ENST00000474648 SMTNP53814 917 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
COL8A1-206ENST00000474648 TYRO3Q06418 890 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 RBL2Q08999 1139 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 KCNA1Q09470 495 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 TFDP1Q14186 410 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 BMT2Q1RMZ1 405 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 KIZQ2M2Z5 673 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF410Q86VK4 478 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 ADSSL1Q8N142 457 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 DEPTORQ8TB45 409 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 PPP1R16BQ96T49 567 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 NFKBIZQ9BYH8 718 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
COL8A1-206ENST00000474648 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 FZD8Q9H461 694 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 TMEM134Q9H6X4 195 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 NOD1Q9Y239 953 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 CDY2AQ9Y6F7 541 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 MROH7Q68CQ1 1323 aa11.03□□□□□ -0.64
COL8A1-206ENST00000474648 DENND3A2RUS2 1198 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 DCDC2CA8MYV0 355 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 CAND2O75155 1236 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 GCNT3O95395 438 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 EDN1P05305 212 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 RPLP2P05387 115 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 CKBP12277 381 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 DARSP14868 501 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 ZNF445P59923 1031 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 MBTD1Q05BQ5 628 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 GPNMBQ14956 572 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 AMHR2Q16671 573 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 DPCR1Q3MIW9 517 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 MLKLQ8NB16 471 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 SLC17A8Q8NDX2 589 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 TMEM40Q8WWA1 233 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 MED15Q96RN5 788 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 GCOM2Q9BZD3 368 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.65
COL8A1-206ENST00000474648 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 TBX21Q9UL17 535 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 TBX20Q9UMR3 447 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms