RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 ADAMTS1Q9UHI8 967 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 DNAJC12Q9UKB3 198 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 MAFBQ9Y5Q3 323 aaPredicted RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 CSADQ9Y600 493 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 EMSYQ7Z589 1322 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 TISP43B9A030 160 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 H0YCG3 227 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 PDE2AO00408 941 aaPredicted RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 DDX3XO00571 662 aaKnown RBP eCLIP10.68□□□□□ -0.79e-13■■■■□ 21.9
USP39-214ENST00000474572 CES2O00748 559 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SLC16A4O15374 487 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 EVI5O60447 810 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SRGAP2O75044 1071 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 TBC1D8O95759 1140 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 ATP4AP20648 1035 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 COPB2P35606 906 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SMTNP53814 917 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SP2Q02086 613 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 PRKCEQ02156 737 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 PPP3CAQ08209 521 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 DMP1Q13316 513 aaPredicted RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 KIF22Q14807 665 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 DRAP1Q14919 205 aaPredicted RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 FAM102BQ5T8I3 360 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 ANKRD13AQ8IZ07 590 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 KRT222Q8N1A0 295 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 MMGT1Q8N4V1 131 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
USP39-214ENST00000474572 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 BSNDQ8WZ55 320 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 RUBCNQ92622 972 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 CEP170P1Q96L14 293 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 OSBPL9Q96SU4 736 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SH2D3AQ9BRG2 576 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 SPATC1LQ9H0A9 340 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 CYP26B1Q9NR63 512 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 RNF181Q9P0P0 153 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 ARHGAP28Q9P2N2 729 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 RNF14Q9UBS8 474 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 KCNG1Q9UIX4 513 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 COQ4Q9Y3A0 265 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 TELO2Q9Y4R8 837 aa10.68□□□□□ -0.7
USP39-214ENST00000474572 NCANO14594 1321 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ADGRA3Q8IWK6 1321 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 SOWAHBA6NEL2 793 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 MAP2K7O14733 419 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 SEC31AO94979 1220 aaKnown RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 PIGRP01833 764 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ADRB2P07550 413 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 GARTP22102 1010 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ADSSP30520 456 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 DLG4P78352 724 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 CNTN2Q02246 1040 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PPIL2Q13356 520 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 MOGSQ13724 837 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PRKG1Q13976 671 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PLS1Q14651 629 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 KIAA0753Q2KHM9 967 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 BEND6Q5SZJ8 279 aaPredicted RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 MEI1Q5TIA1 1274 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PHLDB3Q6NSJ2 640 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ALKBH5Q6P6C2 394 aaKnown RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 TAS1R3Q7RTX0 852 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 VPS36Q86VN1 386 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 LNX1Q8TBB1 728 aaPredicted RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PACSIN1Q9BY11 444 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 FUT8Q9BYC5 575 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 PCIF1Q9H4Z3 704 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 DHX33Q9H6R0 707 aaKnown RBP10.67□□□□□ -0.7
USP39-214ENST00000474572 ARFGAP3Q9NP61 516 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 AGTPBP1Q9UPW5 1226 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
USP39-214ENST00000474572 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
USP39-214ENST00000474572 ZSWIM8A7E2V4 1837 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 GRID2IPA4D2P6 1211 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 ZNF185O15231 689 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 BUB1O43683 1085 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 PALMO75781 387 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 SASH3O75995 380 aa10.66□□□□□ -0.7
USP39-214ENST00000474572 FARP2O94887 1054 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms