RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ATP6V1C1P21283 382 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 CASP5P51878 434 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 MPP2Q14168 576 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 CCDC25Q86WR0 208 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 CTNNBL1Q8WYA6 563 aaPredicted RBP20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 ARHGEF26Q96DR7 871 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 DDX23Q9BUQ8 820 aaKnown RBP20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 PIDD1Q9HB75 910 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 KCNK9Q9NPC2 374 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 GCNT4Q9P109 453 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 PCYOX1Q9UHG3 505 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 RTN3O95197 1032 aaPredicted RBP20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 NPTXRO95502 500 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 CCDC15Q0P6D6 951 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 ERFEQ4G0M1 354 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 ZDHHC14Q8IZN3 488 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 PIGOQ8TEQ8 1089 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 STK32AQ8WU08 396 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 TEKT4Q8WW24 435 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 RUNDC3BQ96NL0 473 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 CYP39A1Q9NYL5 469 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 GPR75-ASB3A0A0A6YYF3 556 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 E7ENQ6 273 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 PARP6Q2NL67 630 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 TCERG1LQ5VWI1 586 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 TXLNGQ9NUQ3 528 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 CTNNAL1Q9UBT7 734 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 ASB3Q9Y575 518 aa20.04■□□□□ 0.8
ECHDC1-214ENST00000474289 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 CCDC137Q6PK04 289 aaKnown RBP20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 GALNT15Q8N3T1 639 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 CELF1Q92879 486 aaKnown RBP20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 LRMDAQ9H2I8 198 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 ZHX3Q9H4I2 956 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 ACSL3O95573 720 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 PLA2G4BP0C869 781 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 CLUL1Q15846 466 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 SLC5A9Q2M3M2 681 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 SGSM1Q2NKQ1 1148 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 ZNF568Q3ZCX4 644 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 CMPK2Q5EBM0 449 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 ZNF444Q8N0Y2 327 aaPredicted RBP20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 HAS1Q92839 578 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 ART4Q93070 314 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 TMEM237Q96Q45 408 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 CDC42EP4Q9H3Q1 356 aaKnown RBP20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 BSDC1Q9NW68 430 aaPredicted RBP20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 COG5Q9UP83 839 aa20.03■□□□□ 0.8
ECHDC1-214ENST00000474289 SYNGAP1Q96PV0 1343 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 AKAP3O75969 853 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 MKRN3Q13064 507 aaKnown RBP20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 LBRQ14739 615 aaKnown RBP20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 MTFR1Q15390 333 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 SERPINB12Q96P63 405 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 MYLK2Q9H1R3 596 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 KIAA1024Q9UPX6 916 aa20.02■□□□□ 0.8
ECHDC1-214ENST00000474289 CYP11B2P19099 503 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 LMNB1P20700 586 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 CTNNA2P26232 953 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 STAT1P42224 750 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 GCLCP48506 637 aaPredicted RBP20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 MARCKSL1P49006 195 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 PEX5P50542 639 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 ACVR2BQ13705 512 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 RRP1BQ14684 758 aaKnown RBP20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 FAM13CQ8NE31 585 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 RPS6KC1Q96S38 1066 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 THAP2Q9H0W7 228 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 TRAF3IP3Q9Y228 551 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 C2CD2Q9Y426 696 aa20.02■□□□□ 0.79
ECHDC1-214ENST00000474289 ALAS1P13196 640 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 FAM43BQ6ZT52 329 aaPredicted RBP20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 ASAP3Q8TDY4 903 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 KRT35Q92764 455 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 SLC35C1Q96A29 364 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 NUDCD1Q96RS6 583 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 NT5C3AQ9H0P0 336 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 LAMB2P55268 1798 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 BRAFP15056 766 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 STX2P32856 288 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 KLC1Q07866 573 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 ITPK1Q13572 414 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 HYIQ5T013 277 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 TMEM154Q6P9G4 183 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 TRMT10CQ7L0Y3 403 aaKnown RBP20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 APLFQ8IW19 511 aaPredicted RBP20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
ECHDC1-214ENST00000474289 PITPNM2Q9BZ72 1349 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 ROBO3Q96MS0 1386 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 POTEB3A0JP26 581 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 POTECB2RU33 542 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 ACADSP16219 412 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 HSPA6P17066 643 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 TARSP26639 723 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 CNGA1P29973 690 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 HOXD13P35453 343 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms