RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 CHD1LQ86WJ1 897 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 ZBTB44Q8NCP5 570 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 CHST12Q9NRB3 414 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 ATRXP46100 2492 aa18.35■□□□□ 0.53
HPS4-210ENST00000473782 SPTLC1O15269 473 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 INPPL1O15357 1258 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 LILRB5O75023 590 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 TMTC3Q6ZXV5 915 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 RAB11FIP4Q86YS3 637 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 GPR161Q8N6U8 529 aaKnown RBP18.34■□□□□ 0.53
HPS4-210ENST00000473782 MAP7D2Q96T17 732 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 NCDNQ9UBB6 729 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 GABBR1Q9UBS5 961 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 FBXO4Q9UKT5 387 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 NUMBLQ9Y6R0 609 aa18.34■□□□□ 0.53
HPS4-210ENST00000473782 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 IPO5O00410 1097 aaKnown RBP18.33■□□□□ 0.52
HPS4-210ENST00000473782 ADAMTS3O15072 1205 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 TEX28O15482 410 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 GPC5P78333 572 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 NUCB1Q02818 461 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 ZNF746Q6NUN9 644 aaPredicted RBP18.33■□□□□ 0.52
HPS4-210ENST00000473782 AGMOQ6ZNB7 445 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 PLA2G4DQ86XP0 818 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 RNF168Q8IYW5 571 aaPredicted RBP18.33■□□□□ 0.52
HPS4-210ENST00000473782 ZNF710Q8N1W2 664 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 RSPH1Q8WYR4 309 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 STAMQ92783 540 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 BORCS6Q96GS4 357 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 GBP3Q9H0R5 595 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 EPC1Q9H2F5 836 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 INPP5FQ9Y2H2 1132 aa18.33■□□□□ 0.52
HPS4-210ENST00000473782 CARNS1A5YM72 827 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 ZNF623O75123 536 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 FOSP01100 380 aaPredicted RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 LMNB2Q03252 620 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 GLB1LQ6UWU2 654 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 SMG7Q92540 1137 aaKnown RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 RPS6KC1Q96S38 1066 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 CEP89Q96ST8 783 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 MRPL17Q9NRX2 175 aaKnown RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 MARCH5Q9NX47 278 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 CDV3Q9UKY7 258 aaKnown RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 SMG5Q9UPR3 1016 aaKnown RBP18.32■□□□□ 0.52
HPS4-210ENST00000473782 PCDHGA2Q9Y5H1 932 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 PCDHA10Q9Y5I2 948 aa18.32■□□□□ 0.52
HPS4-210ENST00000473782 C2CD2LO14523 706 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 SOD2P04179 222 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 TMOD1P28289 359 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 CSTF1Q05048 431 aaKnown RBP18.31■□□□□ 0.52
HPS4-210ENST00000473782 FUT2Q10981 343 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 SNW1Q13573 536 aaKnown RBP18.31■□□□□ 0.52
HPS4-210ENST00000473782 TARBP2Q15633 366 aaKnown RBP18.31■□□□□ 0.52
HPS4-210ENST00000473782 FGF14Q92915 247 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 NT5C3AQ9H0P0 336 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 RXFP1Q9HBX9 757 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 SPATA6Q9NWH7 488 aaPredicted RBP18.31■□□□□ 0.52
HPS4-210ENST00000473782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.31■□□□□ 0.52
HPS4-210ENST00000473782 ASPMQ8IZT6 3477 aa18.31■□□□□ 0.52
HPS4-210ENST00000473782 PATJQ8NI35 1801 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 KANSL1LA0AUZ9 987 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 NRP1O14786 923 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 PRC1O43663 620 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 IGHDP01880 384 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 CYP3A4P08684 503 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 RNASELQ05823 741 aaKnown RBP18.3■□□□□ 0.52
HPS4-210ENST00000473782 UGCGQ16739 394 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 PARM1Q6UWI2 310 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 FANCBQ8NB91 859 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 FRYQ5TBA9 3013 aa18.3■□□□□ 0.52
HPS4-210ENST00000473782 MYH9P35579 1960 aaKnown RBP18.3■□□□□ 0.52
HPS4-210ENST00000473782 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 A0A087WZ62 844 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 LAMTOR5O43504 91 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 OATP04181 439 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 PSAPP07602 524 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
HPS4-210ENST00000473782 AK2P54819 239 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 TWF2Q6IBS0 349 aaKnown RBP18.29■□□□□ 0.52
HPS4-210ENST00000473782 GET4Q7L5D6 327 aaPredicted RBP18.29■□□□□ 0.52
HPS4-210ENST00000473782 TEX2Q8IWB9 1127 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 SMAP1Q8IYB5 467 aaPredicted RBP18.29■□□□□ 0.52
HPS4-210ENST00000473782 ATRIPQ8WXE1 791 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 FDXACB1Q9BRP7 624 aaPredicted RBP18.29■□□□□ 0.52
HPS4-210ENST00000473782 ZNF577Q9BSK1 485 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 HERC2P3Q9BVR0 1158 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms