RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 RFC5P40937 340 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 CLCN6P51797 869 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 EMC2Q15006 297 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 ZCWPW2Q504Y3 356 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 MFSD14CQ5VZR4 134 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 ARMCX5Q6P1M9 558 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 CSGALNACT2Q8N6G5 542 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 NOC3LQ8WTT2 800 aaKnown RBP16.21■□□□□ 0.19
LMNA-213ENST00000473598 ZNF592Q92610 1267 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 ZNF333Q96JL9 665 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 TSG101Q99816 390 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.19
LMNA-213ENST00000473598 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 C17orf75Q9HAS0 396 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 UBE4BO95155 1302 aa16.21■□□□□ 0.19
LMNA-213ENST00000473598 HOXD13P35453 343 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.18
LMNA-213ENST00000473598 STXBP4Q6ZWJ1 553 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 TLK2Q86UE8 772 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 GPATCH11Q8N954 259 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 TRPV1Q8NER1 839 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 SLC7A3Q8WY07 619 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 ARMC5Q96C12 935 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 C16orf70Q9BSU1 422 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 STRA6Q9BX79 667 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 Q9Y3F1 56 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 KAT6AQ92794 2004 aa16.21■□□□□ 0.18
LMNA-213ENST00000473598 DYNC1LI2O43237 492 aaPredicted RBP16.2■□□□□ 0.18
LMNA-213ENST00000473598 HBP1O60381 514 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
LMNA-213ENST00000473598 PEX3P56589 373 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 SOX10P56693 466 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 RTP1P59025 263 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 DGKDQ16760 1214 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 NBPF20Q3BBV1 942 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 ZC2HC1CQ53FD0 456 aaPredicted RBP16.2■□□□□ 0.18
LMNA-213ENST00000473598 RPAINQ86UA6 219 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 EXOC4Q96A65 974 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 ABHD8Q96I13 439 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 L2HGDHQ9H9P8 463 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 INTS13Q9NVM9 706 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 PCDHB13Q9Y5F0 798 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 EVPLQ92817 2033 aa16.2■□□□□ 0.18
LMNA-213ENST00000473598 A6NJR5 290 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 ZBTB42B2RXF5 422 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 K7ENM7 598 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 PPP1R37O75864 691 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 ZNF286BP0CG31 522 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 CYBAP13498 195 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 AKR1A1P14550 325 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 NCKAP1LP55160 1127 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 SPAG1Q07617 926 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 ALCAMQ13740 583 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 MAP3K21Q5TCX8 1036 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 SLC17A8Q8NDX2 589 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 ST6GALNAC4Q9H4F1 302 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.185e-9■■□□□ 12.4
LMNA-213ENST00000473598 PDXKO00764 312 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
LMNA-213ENST00000473598 KCNA1Q09470 495 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 DMP1Q13316 513 aaPredicted RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 TCP11X2Q5H9J9 407 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 TMCO3Q6UWJ1 677 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 PPM1EQ8WY54 764 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 LENG1Q96BZ8 264 aaPredicted RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 NTPCRQ9BSD7 190 aaKnown RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 POLR3FQ9H1D9 316 aaPredicted RBP16.19■□□□□ 0.18
LMNA-213ENST00000473598 TRAF3IP3Q9Y228 551 aa16.19■□□□□ 0.18
LMNA-213ENST00000473598 KCNJ18B7U540 433 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 H3BRB1 525 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 FGFR1OPO95684 399 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 NPTX2P47972 431 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 SMTNP53814 917 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 FKBP3Q00688 224 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 KCNJ12Q14500 433 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 HAUS6Q7Z4H7 955 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 PACS2Q86VP3 889 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 SPIRE2Q8WWL2 714 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 BSNDQ8WZ55 320 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 TYW1Q9NV66 732 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 LIMA1Q9UHB6 759 aaKnown RBP16.18■□□□□ 0.18
LMNA-213ENST00000473598 DNAH12Q6ZR08 3092 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
LMNA-213ENST00000473598 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms