RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FMO1Q01740 532 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PLS1Q14651 629 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 MUM1Q2TAK8 710 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 DACT2Q5SW24 774 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SEZ6L2Q6UXD5 910 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CRACR2BQ8N4Y2 399 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 MFSD2AQ8NA29 543 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PCSK9Q8NBP7 692 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 ACRBPQ8NEB7 543 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 IL31RAQ8NI17 732 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TTC9Q92623 222 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 HVCN1Q96D96 273 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 C1GALT1C1Q96EU7 318 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 LRRC46Q96FV0 321 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SCARF2Q96GP6 870 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 CCDC140Q96MF4 163 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 COL25A1Q9BXS0 654 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 PRKRIP1Q9H875 184 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 ERVK13-1Q9NX77 482 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 USP18Q9UMW8 372 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SIK3Q9Y2K2 1263 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ABCA10Q8WWZ4 1543 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PREX1Q8TCU6 1659 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 C22orf46C9J442 243 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 RNF225M0QZC1 329 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 FGF10O15520 208 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 FGF18O76093 207 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 HRGP04196 525 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 DHRS4L1P0CG22 281 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TGFB3P10600 412 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 NPR1P16066 1061 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PTPN1P18031 435 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 FGFR4P22455 802 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 IFIT5Q13325 482 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 TDGQ13569 410 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TRAPPC3LQ5T215 181 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 IZUMO3Q5VZ72 239 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SULT6B1Q6IMI4 303 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 LRSAM1Q6UWE0 723 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 FAM214BQ7L5A3 538 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SRGAP1Q7Z6B7 1085 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 MAP4K3Q8IVH8 894 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 RHOT1Q8IXI2 618 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TMEM151AQ8N4L1 468 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 KCT2Q8NC54 265 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 UCMAQ8WVF2 138 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 LDAHQ9H6V9 325 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 AGO4Q9HCK5 861 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 SEPSECSQ9HD40 501 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 DCP1AQ9NPI6 582 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 RIC8BQ9NVN3 520 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 ZSWIM5Q9P217 1185 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PHF24Q9UPV7 400 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 LRCH1Q9Y2L9 728 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ERICH3Q5RHP9 1530 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 RUSC2Q8N2Y8 1516 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 A0A0A0MRY4 1105 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 GLI1P08151 1106 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ALADP13716 330 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TPP2P29144 1249 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 LSP1P33241 339 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 AFMP43652 599 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SLC6A9P48067 706 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 PNLIPRP1P54315 467 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 RPS16P62249 146 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 OCRLQ01968 901 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 MYBPC2Q14324 1141 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ZNF174Q15697 407 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 UGT8Q16880 541 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CCDC157Q569K6 752 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 EEF1DP3Q658K8 133 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CWF19L1Q69YN2 538 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 RETSATQ6NUM9 610 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 Q6ZVL8 140 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 GALNT5Q7Z7M9 940 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 CILP2Q8IUL8 1156 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 FMR1NBQ8N0W7 255 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 ZGPATQ8N5A5 531 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 GLB1L3Q8NCI6 653 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 PLEKHO2Q8TD55 490 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SLC26A6Q9BXS9 759 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 TTYH1Q9H313 450 aaPredicted RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 RIC8AQ9NPQ8 531 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 MRPS18AQ9NVS2 196 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 COL20A1Q9P218 1284 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 ABCF2Q9UG63 623 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 DSEQ9UL01 958 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 WASF3Q9UPY6 502 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 SF3B6Q9Y3B4 125 aaKnown RBP3.16□□□□□ -1.9
XRN1-210ENST00000472697 PCDHA1Q9Y5I3 950 aa3.16□□□□□ -1.9
XRN1-210ENST00000472697 MAGI3Q5TCQ9 1506 aa3.15□□□□□ -1.9
XRN1-210ENST00000472697 PTPRMP28827 1452 aa3.15□□□□□ -1.9
XRN1-210ENST00000472697 A0A1B0GVC2 190 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 PRAMEF25A6NGN4 478 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 APOL1O14791 398 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 NPC1O15118 1278 aa3.15□□□□□ -1.91
XRN1-210ENST00000472697 CSTBP04080 98 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms