RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
CD46-213ENST00000471987 ZNF512Q96ME7 567 aaPredicted RBP6.9□□□□□ -1.3
CD46-213ENST00000471987 UIMC1Q96RL1 719 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 NCDNQ9UBB6 729 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 CD2APQ9Y5K6 639 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 DSG1Q02413 1049 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 SPIDRQ14159 915 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 C16orf86Q6ZW13 317 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 LRRTM3Q86VH5 581 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 CLIP3Q96DZ5 547 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 CEP89Q96ST8 783 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 SLC2A4RGQ9NR83 387 aa6.89□□□□□ -1.31
CD46-213ENST00000471987 USP36Q9P275 1121 aaKnown RBP6.89□□□□□ -1.31
CD46-213ENST00000471987 XDHP47989 1333 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 A0A0A6YYK5 440 aaPredicted RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 GOLGA6L6A8MZA4 724 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 RABGGTBP53611 331 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 TOB2Q14106 344 aaPredicted RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 ELOA2Q8IYF1 753 aaPredicted RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 CHTF18Q8WVB6 975 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 ATXN2LQ8WWM7 1075 aaKnown RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 LARP4BQ92615 738 aaKnown RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 APPBP2Q92624 585 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 NINJ1Q92982 152 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 SOX7Q9BT81 388 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 IKZF4Q9H2S9 585 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 PIF1Q9H611 641 aa6.88□□□□□ -1.31
CD46-213ENST00000471987 THG1LQ9NWX6 298 aaKnown RBP6.88□□□□□ -1.31
CD46-213ENST00000471987 MYPNQ86TC9 1320 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 ST20-MTHFSA0A0A6YYL1 179 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 ZNF891A8MT65 544 aaPredicted RBP6.87□□□□□ -1.31
CD46-213ENST00000471987 PCDH8O95206 1070 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 KPNA1P52294 538 aaPredicted RBP6.87□□□□□ -1.31
CD46-213ENST00000471987 SLC25A3Q00325 362 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 ESPNLQ6ZVH7 1005 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 HTR3DQ70Z44 454 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 MDGA1Q8NFP4 955 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 MNTQ99583 582 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 MTFR1LQ9H019 292 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 PCDHB6Q9Y5E3 794 aa6.87□□□□□ -1.31
CD46-213ENST00000471987 A0A087X1B8 175 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 NRP1O14786 923 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 GAAP10253 952 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 GNAT2P19087 354 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 OCRLQ01968 901 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 SART3Q15020 963 aaKnown RBP6.86□□□□□ -1.31
CD46-213ENST00000471987 GPR158Q5T848 1215 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 UNC5BQ8IZJ1 945 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 MB21D1Q8N884 522 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 CDYL2Q8N8U2 506 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 PPP1R14CQ8TAE6 165 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 ST8SIA2Q92186 375 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 FERMT2Q96AC1 680 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 PRRX2Q99811 253 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 FANCLQ9NW38 375 aa6.86□□□□□ -1.31
CD46-213ENST00000471987 KLRG2A4D1S0 409 aaPredicted RBP6.85□□□□□ -1.31
CD46-213ENST00000471987 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 ELL2O00472 640 aaPredicted RBP6.85□□□□□ -1.31
CD46-213ENST00000471987 PTGS2P35354 604 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 INHBEP58166 350 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 SMN1Q16637 294 aaKnown RBP6.85□□□□□ -1.31
CD46-213ENST00000471987 TKFCQ3LXA3 575 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 RABL3Q5HYI8 236 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 APBB1IPQ7Z5R6 666 aaPredicted RBP6.85□□□□□ -1.31
CD46-213ENST00000471987 LDLRAD3Q86YD5 345 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 NIM1KQ8IY84 436 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 ULK2Q8IYT8 1036 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 PPM1KQ8N3J5 372 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 MSRAQ9UJ68 235 aa6.85□□□□□ -1.31
CD46-213ENST00000471987 TGM5O43548 720 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 ALDH1A2O94788 518 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 PHC1P78364 1004 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 DCAF17Q5H9S7 520 aaPredicted RBP6.84□□□□□ -1.31
CD46-213ENST00000471987 ZNF627Q7L945 461 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 MRGPRGQ86SM5 289 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 AHI1Q8N157 1196 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 SMC1BQ8NDV3 1235 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
CD46-213ENST00000471987 PGBD4Q96DM1 585 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 ZNF496Q96IT1 587 aaPredicted RBP6.84□□□□□ -1.31
CD46-213ENST00000471987 NRDE2Q9H7Z3 1164 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.84□□□□□ -1.31
CD46-213ENST00000471987 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 GPRC5BQ9NZH0 403 aa6.84□□□□□ -1.31
CD46-213ENST00000471987 NRP2O60462 931 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 FAM20BO75063 409 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 SCNN1BP51168 640 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 CD69Q07108 199 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 CCDC178Q5BJE1 867 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 C1QL3Q5VWW1 255 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 NAIF1Q69YI7 327 aaPredicted RBP6.83□□□□□ -1.32
CD46-213ENST00000471987 ZNF610Q8N9Z0 462 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 PIK3C3Q8NEB9 887 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 HAS1Q92839 578 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 TRPS1Q9UHF7 1281 aa6.83□□□□□ -1.32
CD46-213ENST00000471987 PLAAQ9Y263 795 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms