RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 OLIG1Q8TAK6 271 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 LMO3Q8TAP4 145 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 CDHR1Q96JP9 859 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 SYT11Q9BT88 431 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 GPR88Q9GZN0 384 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 HSPBP1Q9NZL4 362 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 EXOC7Q9UPT5 735 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 H3BQF6 201 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 STAM2O75886 525 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 TNFRSF8P28908 595 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 LMBR1Q8WVP7 490 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 LRRC1Q9BTT6 524 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 TEX13BQ9BXU2 312 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 MED4Q9NPJ6 270 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 AFG3L2Q9Y4W6 797 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 NFASCO94856 1347 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 LOC285556D6RIA3 1793 aa20.22■□□□□ 0.83
COL20A1-205ENST00000471582 IQCA1LA6NCM1 817 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 LRRIQ3A6PVS8 624 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 POLR3GO15318 223 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 AARSP49588 968 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 PEX3P56589 373 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 OTUD6AQ7L8S5 288 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 ATP6V0A1Q93050 837 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 CBWD1Q9BRT8 395 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 STIM2Q9P246 746 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 CSADQ9Y600 493 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 ADM5C9JUS6 153 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 KCNA2P16389 499 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 SMTNP53814 917 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 KIF22Q14807 665 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 ANO5Q75V66 913 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 ZNF771Q7L3S4 317 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 LNX1Q8TBB1 728 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 SPIRE2Q8WWL2 714 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 TAF4BQ92750 862 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 KIFAP3Q92845 792 aa20.21■□□□□ 0.83
COL20A1-205ENST00000471582 RBM12Q9NTZ6 932 aaKnown RBP20.21■□□□□ 0.83
COL20A1-205ENST00000471582 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 EMSYQ7Z589 1322 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 SLC16A4O15374 487 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 TMEM132BQ14DG7 1078 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 RPS6KA1Q15418 735 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 EPC2Q52LR7 807 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 C8orf74Q6P047 294 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 SLFN11Q7Z7L1 901 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 MAP4K3Q8IVH8 894 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 SYCE1Q8N0S2 351 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 RDH13Q8NBN7 331 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 TPCN2Q8NHX9 752 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 AENQ8WTP8 325 aaKnown RBP20.2■□□□□ 0.82
COL20A1-205ENST00000471582 U2AF1L4Q8WU68 220 aaKnown RBP20.2■□□□□ 0.82
COL20A1-205ENST00000471582 PBKQ96KB5 322 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 PCIF1Q9H4Z3 704 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 ACAD9Q9H845 621 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 HOXC10Q9NYD6 342 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 EHD2Q9NZN4 543 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 NCANO14594 1321 aa20.2■□□□□ 0.82
COL20A1-205ENST00000471582 TMEM150BA6NC51 233 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 KIF4AO95239 1232 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 VGLL4Q14135 290 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 SH3D19Q5HYK7 790 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 FAM102BQ5T8I3 360 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PLA2G4FQ68DD2 849 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PHLDB3Q6NSJ2 640 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 FAM71BQ8TC56 605 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 MS4A14Q96JA4 679 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 NTPCRQ9BSD7 190 aaKnown RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 ZMYND15Q9H091 742 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 GPRC5CQ9NQ84 441 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 CYP39A1Q9NYL5 469 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 SMARCAL1Q9NZC9 954 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 ARID2Q68CP9 1835 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 WDR81Q562E7 1941 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 TISP43B9A030 160 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 ZMYND10O75800 440 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 TMEM253P0C7T8 217 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 MYBL2P10244 700 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 TNNT3P45378 269 aaPredicted RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 RTP1P59025 263 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 DLG4P78352 724 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PPP3CAQ08209 521 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 SELENOOQ9BVL4 669 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 ZCCHC17Q9NP64 241 aaKnown RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 DMGDHQ9UI17 866 aaKnown RBP20.19■□□□□ 0.82
COL20A1-205ENST00000471582 TBX20Q9UMR3 447 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PAPPA2Q9BXP8 1791 aa20.19■□□□□ 0.82
COL20A1-205ENST00000471582 PSAPP07602 524 aa20.18■□□□□ 0.82
COL20A1-205ENST00000471582 NF2P35240 595 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms