RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GOLGA8JA6NMD2 632 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 PGRMC1O00264 195 aaKnown RBP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 SLC16A4O15374 487 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 ECHS1P30084 290 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 VAMP7P51809 220 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 PEX3P56589 373 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 NIPA1Q7RTP0 329 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 DDX42Q86XP3 938 aaKnown RBP eCLIP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 PIK3R5Q8WYR1 880 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 LPAR1Q92633 364 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 KAT5Q92993 513 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 HES6Q96HZ4 224 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 UBE2TQ9NPD8 197 aaPredicted RBP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 HSPBP1Q9NZL4 362 aa15.93■□□□□ 0.14
CBWD3-205ENST00000469687 SUCLA2Q9P2R7 463 aaPredicted RBP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 DBR1Q9UK59 544 aaKnown RBP15.93■□□□□ 0.14
CBWD3-205ENST00000469687 NCANO14594 1321 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 HSF2BPO75031 334 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 TMEM253P0C7T8 217 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 KRT13P13646 458 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 GHRHRQ02643 423 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 NNTQ13423 1086 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 DNAJC21Q5F1R6 531 aaKnown RBP15.92■□□□□ 0.14
CBWD3-205ENST00000469687 CIAPIN1Q6FI81 312 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 HAUS6Q7Z4H7 955 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 RFFLQ8WZ73 363 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 ACCSQ96QU6 501 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 FZD1Q9UP38 647 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 COG5Q9UP83 839 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 TESPA1A2RU30 521 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-205ENST00000469687 SART1O43290 800 aaKnown RBP15.92■□□□□ 0.14
CBWD3-205ENST00000469687 ADRB2P07550 413 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 TNFAIP3P21580 790 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 DCAF12L1Q5VU92 463 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 NSMFQ6X4W1 530 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 INTS8Q75QN2 995 aaKnown RBP15.92■□□□□ 0.14
CBWD3-205ENST00000469687 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 RMDN3Q96TC7 470 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 TMEM206Q9H813 350 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 NR2E1Q9Y466 385 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 TELO2Q9Y4R8 837 aa15.92■□□□□ 0.14
CBWD3-205ENST00000469687 ZNFX1Q9P2E3 1918 aaKnown RBP15.91■□□□□ 0.14
CBWD3-205ENST00000469687 ZNF233A6NK53 670 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 SOX10P56693 466 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 PPATQ06203 517 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 KIF22Q14807 665 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 ALS2CLQ60I27 953 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 ZNF746Q6NUN9 644 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-205ENST00000469687 SAMD7Q7Z3H4 446 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 IQCKQ8N0W5 287 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 SH2D3CQ8N5H7 860 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 LMBR1Q8WVP7 490 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 CTNNBL1Q8WYA6 563 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-205ENST00000469687 ELMO3Q96BJ8 720 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 PDCD2LQ9BRP1 358 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 NEUROG2Q9H2A3 272 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 RPAP3Q9H6T3 665 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-205ENST00000469687 ACP6Q9NPH0 428 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 CHORDC1Q9UHD1 332 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-205ENST00000469687 AMACRQ9UHK6 382 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 LCMT1Q9UIC8 334 aa15.91■□□□□ 0.14
CBWD3-205ENST00000469687 KRIT1O00522 736 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 RPS6KA5O75582 802 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 GTF2BQ00403 316 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 MYBPC2Q14324 1141 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 EPC2Q52LR7 807 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 FAM102BQ5T8I3 360 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 NAA35Q5VZE5 725 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 KCTD16Q68DU8 428 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 TTC19Q6DKK2 380 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 SYCE1Q8N0S2 351 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 RASGEF1CQ8N431 466 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 ATG4CQ96DT6 458 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 RUFY1Q96T51 708 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 AGPAT1Q99943 283 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 PXMP2Q9NR77 195 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 AMFRQ9UKV5 643 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 ANKRD63C9JTQ0 380 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 GOLGA8KD6RF30 607 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 DDX3YO15523 660 aaKnown RBP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 LYPLA2O95372 231 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 ADSSP30520 456 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 HLTFQ14527 1009 aaKnown RBP eCLIP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 XKR9Q5GH70 373 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 CBWD2Q8IUF1 395 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 CELF4Q9BZC1 486 aaKnown RBP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 TMEM117Q9H0C3 514 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-205ENST00000469687 TBC1D22BQ9NU19 505 aa15.9■□□□□ 0.14
CBWD3-205ENST00000469687 OPA1O60313 960 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 FGGP02679 453 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 USP8P40818 1118 aa15.89■□□□□ 0.13
CBWD3-205ENST00000469687 BAATQ14032 418 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-205ENST00000469687 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms