RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SCARF1Q14162 830 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 LRRC14Q15048 493 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 TBC1D9BQ66K14 1250 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 GALNT17Q6IS24 598 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 RGS9BPQ6ZS82 235 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 SPATA24Q86W54 205 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 IFNL3Q8IZI9 196 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 WDR60Q8WVS4 1066 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 STMN2Q93045 179 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 CLMNQ96JQ2 1002 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 PACSIN1Q9BY11 444 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 PITPNM3Q9BZ71 974 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 TMEM60Q9H2L4 133 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 STK32BQ9NY57 414 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 CHKBQ9Y259 395 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
SMARCE1-207ENST00000469334 A0A0J9YVX5 310 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 STRNO43815 780 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 TCEA3O75764 348 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 NOL4O94818 638 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 GNAT2P19087 354 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 ADORA1P30542 326 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 SESN3P58005 492 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 IL9RQ01113 521 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 RAPGEF1Q13905 1077 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 ADRM1Q16186 407 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 PI16Q6UXB8 463 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 PIK3AP1Q6ZUJ8 805 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 NT5DC3Q86UY8 548 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 PIP4K2CQ8TBX8 421 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 FBXO25Q8TCJ0 367 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF398Q8TD17 642 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 MGARPQ8TDB4 240 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 NRG4Q8WWG1 115 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 ESR2Q92731 530 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 TRIM31Q9BZY9 425 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 TIMMDC1Q9NPL8 285 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 GRHL1Q9NZI5 618 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 AMFRQ9UKV5 643 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 BARX2Q9UMQ3 279 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF532Q9HCE3 1301 aa9.69□□□□□ -0.86
SMARCE1-207ENST00000469334 PVALEFA0A1B0GWK0 134 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CAPN9O14815 690 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 TTLL1O95922 423 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 FGGP02679 453 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 T-ENOLP0DO92 83 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 PDE6AP16499 860 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 TAC1P20366 129 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CHRNA3P32297 505 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 RPL26P61254 145 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 MOGSQ13724 837 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 SEC23AQ15436 765 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 WDR72Q3MJ13 1102 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 KHDC1Q4VXA5 237 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 SLC45A4Q5BKX6 768 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF790Q6PG37 636 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 LRRC55Q6ZSA7 311 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CMTR1Q8N1G2 835 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 KIAA0895Q8NCT3 520 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 LSM14BQ9BX40 385 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 NACAP1Q9BZK3 213 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 NT5C3AQ9H0P0 336 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 SPATA7Q9P0W8 599 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 LGALS13Q9UHV8 139 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 TMED5Q9Y3A6 229 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ALS2Q96Q42 1657 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 TCRBV5S4A2TA0A5A2 114 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.863e-10■■■■□ 24
SMARCE1-207ENST00000469334 WDR46O15213 610 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CCDC22O60826 627 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 PHF2O75151 1096 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 DDAH1O94760 285 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 PCCAP05165 728 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 HNRNPCP07910 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 GPSM2P81274 684 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 DSG1Q02413 1049 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CYLC2Q14093 348 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 BTG3Q14201 252 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CYFIP1Q7L576 1253 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ARHGAP24Q8N264 748 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ANKRD42Q8N9B4 389 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 DIS3LQ8TF46 1054 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 PUS3Q9BZE2 481 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 UNC45AQ9H3U1 944 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 KCNK9Q9NPC2 374 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 TCP11L1Q9NUJ3 509 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 ETNK2Q9NVF9 386 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms