RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CLDN23Q96B33 292 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 RIOX1Q9H6W3 641 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 NRDE2Q9H7Z3 1164 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 TBC1D13Q9NVG8 400 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDAC6-217ENST00000469223 INPP5FQ9Y2H2 1132 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 TICRRQ7Z2Z1 1910 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 UNC79Q9P2D8 2635 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 ZBTB42B2RXF5 422 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 MEIS2O14770 477 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 C22orf31O95567 290 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 GLUD1P00367 558 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 MX1P20591 662 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-217ENST00000469223 ELMSAN1Q6PJG2 1045 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 TPRG1Q6ZUI0 275 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 EXOC6Q8TAG9 804 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 LPPQ93052 612 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 PHKBQ93100 1093 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 MRPL17Q9NRX2 175 aaKnown RBP14.38□□□□□ -0.11
HDAC6-217ENST00000469223 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-217ENST00000469223 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 UBIAD1Q9Y5Z9 338 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 COL4A2P08572 1712 aa14.38□□□□□ -0.11
HDAC6-217ENST00000469223 A0A0U1RQF3 1178 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 SRRM3A6NNA2 597 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 ZNF213O14771 459 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 HBP1O60381 514 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 LILRB3O75022 631 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 ADH1AP07327 375 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 FGFR4P22455 802 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 RPS9P46781 194 aaKnown RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 CLCN3P51790 818 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 AK2P54819 239 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 RNASELQ05823 741 aaKnown RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 GRM4Q14833 912 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 LONRF3Q496Y0 759 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 METTL13Q8N6R0 699 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 MAP4K1Q92918 833 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 ZNF668Q96K58 619 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 TDRD15B5MCY1 1934 aaKnown RBP14.37□□□□□ -0.11
HDAC6-217ENST00000469223 ADAMTS20P59510 1910 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 KALRNO60229 2985 aa14.37□□□□□ -0.11
HDAC6-217ENST00000469223 PDCD11Q14690 1871 aaKnown RBP14.36□□□□□ -0.11
HDAC6-217ENST00000469223 CARNS1A5YM72 827 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 BACH1O14867 736 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 TEX28O15482 410 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 URODP06132 367 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 NT5C2P49902 561 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 SLC26A2P50443 739 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 SIM2Q14190 667 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-217ENST00000469223 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-217ENST00000469223 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 DPP7Q9UHL4 492 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 NOTCH4Q99466 2003 aa14.36□□□□□ -0.11
HDAC6-217ENST00000469223 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
HDAC6-217ENST00000469223 LIMK1P53667 647 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 NRLP54845 237 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 NLRP11P59045 1033 aaKnown RBP14.35□□□□□ -0.11
HDAC6-217ENST00000469223 SF3A2Q15428 464 aaKnown RBP14.35□□□□□ -0.11
HDAC6-217ENST00000469223 NOMO2Q5JPE7 1267 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-217ENST00000469223 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 KXD1Q9BQD3 176 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-217ENST00000469223 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 AKT3Q9Y243 479 aa14.35□□□□□ -0.11
HDAC6-217ENST00000469223 MEIS3P2A8K0S8 358 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 TAF4O00268 1085 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 TM4SF5O14894 197 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 NCAM2O15394 837 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 FOXD2O60548 495 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-217ENST00000469223 KCNK5O95279 499 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 SPINK2P20155 84 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 FSHRP23945 695 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 PFKPQ01813 784 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 SRSF5Q13243 272 aaKnown RBP14.34□□□□□ -0.11
HDAC6-217ENST00000469223 ITGB3BPQ13352 177 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-217ENST00000469223 SEC23AQ15436 765 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 UBE2SQ16763 222 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 FAM160B1Q5W0V3 765 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 PSAPL1Q6NUJ1 521 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 GLB1LQ6UWU2 654 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 ZCCHC14Q8WYQ9 949 aaKnown RBP14.34□□□□□ -0.11
HDAC6-217ENST00000469223 RPS6KC1Q96S38 1066 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 HERC2P3Q9BVR0 1158 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 RXFP3Q9NSD7 469 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 DACT1Q9NYF0 836 aa14.34□□□□□ -0.11
HDAC6-217ENST00000469223 ZFP37Q9Y6Q3 630 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms