RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 COG5Q9UP83 839 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 A0A0U1RQF3 1178 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 LAD1O00515 517 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 PDCP20941 246 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 MUTP22033 750 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
COL27A1-203ENST00000468565 TIGD5Q53EQ6 642 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 TJAP1Q5JTD0 557 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 SRGAP1Q7Z6B7 1085 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.16
COL27A1-203ENST00000468565 BMP2KQ9NSY1 1161 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-203ENST00000468565 H3BQV1 296 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 DLL1O00548 723 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 MED24O75448 989 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 CSDE1O75534 798 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 EOMESO95936 686 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 IBSPP21815 317 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 RPA1P27694 616 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 MRPS5P82675 430 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 MXD4Q14582 209 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 FAM102BQ5T8I3 360 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 NACC1Q96RE7 527 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 TMEM117Q9H0C3 514 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 DBR1Q9UK59 544 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 PCDHB6Q9Y5E3 794 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 TBKBP1A7MCY6 615 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 PTGDRQ13258 359 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 CATSPER4Q7RTX7 472 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
COL27A1-203ENST00000468565 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 STK24Q9Y6E0 443 aa16.07■□□□□ 0.16
COL27A1-203ENST00000468565 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 FGFR1P11362 822 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 SKIP12755 728 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PRPHP41219 470 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PDIA5Q14554 519 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 AAK1Q2M2I8 961 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 ZNF598Q86UK7 904 aaKnown RBP16.06■□□□□ 0.16
COL27A1-203ENST00000468565 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 AAASQ9NRG9 546 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
COL27A1-203ENST00000468565 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
COL27A1-203ENST00000468565 VCANP13611 3396 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 GRM6O15303 877 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 ARL2P36404 184 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PHKA2P46019 1235 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 RAB27AP51159 221 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 TFDP1Q14186 410 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL27A1-203ENST00000468565 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 RSPH1Q8WYR4 309 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 HLA-CQ95604 372 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
COL27A1-203ENST00000468565 CUL9Q8IWT3 2517 aa16.05■□□□□ 0.16
COL27A1-203ENST00000468565 PTENP60484 403 aa16.05■□□□□ 0.16
COL27A1-203ENST00000468565 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
COL27A1-203ENST00000468565 TWF2Q6IBS0 349 aaKnown RBP16.05■□□□□ 0.16
COL27A1-203ENST00000468565 ABI1Q8IZP0 508 aa16.05■□□□□ 0.16
COL27A1-203ENST00000468565 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
COL27A1-203ENST00000468565 NSUN3Q9H649 340 aaKnown RBP16.05■□□□□ 0.16
COL27A1-203ENST00000468565 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
COL27A1-203ENST00000468565 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 ATF7P17544 494 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 KLHL23Q8NBE8 558 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 NFKBIZQ9BYH8 718 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 CWH43Q9H720 699 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 MINDY3Q9H8M7 445 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 GDPD2Q9HCC8 539 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 PCDHB12Q9Y5F1 795 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 TCHHQ07283 1943 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 A0A087WWV3 80 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 SYCE3A1L190 88 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 ZNF623O75123 536 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 ITGB1P05556 798 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 LAG3P18627 525 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms