RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 ATP6V0A4Q9HBG4 840 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 ARFGAP3Q9NP61 516 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 CALCOCO1Q9P1Z2 691 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
PMF1-204ENST00000466489 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 AKT3Q9Y243 479 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 MKI67P46013 3256 aaKnown RBP11.01□□□□□ -0.65
PMF1-204ENST00000466489 MYH11P35749 1972 aa11.01□□□□□ -0.65
PMF1-204ENST00000466489 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
PMF1-204ENST00000466489 MED24O75448 989 aa11□□□□□ -0.65
PMF1-204ENST00000466489 IPO7O95373 1038 aaKnown RBP11□□□□□ -0.65
PMF1-204ENST00000466489 C22orf31O95567 290 aa11□□□□□ -0.65
PMF1-204ENST00000466489 FGFR1OPO95684 399 aaKnown RBP11□□□□□ -0.65
PMF1-204ENST00000466489 SPATA31C1P0DKV0 1188 aa11□□□□□ -0.65
PMF1-204ENST00000466489 CKBP12277 381 aa11□□□□□ -0.65
PMF1-204ENST00000466489 ACTN1P12814 892 aa11□□□□□ -0.65
PMF1-204ENST00000466489 H2AFXP16104 143 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 CYP2C18P33260 490 aa11□□□□□ -0.65
PMF1-204ENST00000466489 ADAM17P78536 824 aa11□□□□□ -0.65
PMF1-204ENST00000466489 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
PMF1-204ENST00000466489 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 MORC3Q14149 939 aa11□□□□□ -0.65
PMF1-204ENST00000466489 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
PMF1-204ENST00000466489 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
PMF1-204ENST00000466489 E4F1Q66K89 784 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 PLA2G4FQ68DD2 849 aa11□□□□□ -0.65
PMF1-204ENST00000466489 CCDC70Q6NSX1 233 aa11□□□□□ -0.65
PMF1-204ENST00000466489 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 SHC4Q6S5L8 630 aa11□□□□□ -0.65
PMF1-204ENST00000466489 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
PMF1-204ENST00000466489 MCPH1Q8NEM0 835 aa11□□□□□ -0.65
PMF1-204ENST00000466489 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
PMF1-204ENST00000466489 HNRNPLLQ8WVV9 542 aaKnown RBP11□□□□□ -0.65
PMF1-204ENST00000466489 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
PMF1-204ENST00000466489 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 MTRQ99707 1265 aa11□□□□□ -0.65
PMF1-204ENST00000466489 NUP58Q9BVL2 599 aa11□□□□□ -0.65
PMF1-204ENST00000466489 CCSER1Q9C0I3 900 aa11□□□□□ -0.65
PMF1-204ENST00000466489 CSRNP2Q9H175 543 aa11□□□□□ -0.65
PMF1-204ENST00000466489 FBXO2Q9UK22 296 aaPredicted RBP11□□□□□ -0.65
PMF1-204ENST00000466489 PCDHA5Q9Y5H7 936 aa11□□□□□ -0.65
PMF1-204ENST00000466489 A6NNZ2 444 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 PP2D1A8MPX8 630 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 ZBTB42B2RXF5 422 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 MAFO75444 373 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 CTSHP09668 335 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 IQCF3P0C7M6 154 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 ZNF18P17022 549 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 RARRES1P49788 294 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 CCL23P55773 120 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 CBX1P83916 185 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 AMPD3Q01432 767 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 TBX2Q13207 712 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 TFDP1Q14186 410 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 EMC2Q15006 297 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 TARBP2Q15633 366 aaKnown RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 IL17AQ16552 155 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 TUBB8Q3ZCM7 444 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 HYIQ5T013 277 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 ZNF771Q7L3S4 317 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 FAM114A1Q8IWE2 563 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 USP38Q8NB14 1042 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 PSPC1Q8WXF1 523 aaKnown RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 GOLGA1Q92805 767 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 BADQ92934 168 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 FAM53CQ9NYF3 392 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 CWC15Q9P013 229 aaKnown RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 WRAP73Q9P2S5 460 aaPredicted RBP10.99□□□□□ -0.65
PMF1-204ENST00000466489 NFE2L3Q9Y4A8 694 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 TRPV2Q9Y5S1 764 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 SCN5AQ14524 2016 aa10.99□□□□□ -0.65
PMF1-204ENST00000466489 A0A1B0GTH6 734 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 CCDC151A5D8V7 595 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 POLR2DO15514 142 aaKnown RBP10.98□□□□□ -0.65
PMF1-204ENST00000466489 ASAP2O43150 1006 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 USO1O60763 962 aaKnown RBP10.98□□□□□ -0.65
PMF1-204ENST00000466489 EYA4O95677 639 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.654e-6■□□□□ 10.9
PMF1-204ENST00000466489 KRT18P05783 430 aaKnown RBP10.98□□□□□ -0.65
PMF1-204ENST00000466489 CDC25AP30304 524 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 STAT6P42226 847 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 MAGEA10P43363 369 aaPredicted RBP10.98□□□□□ -0.65
PMF1-204ENST00000466489 CLCN3P51790 818 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 NPEPPSP55786 919 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 HIC1Q14526 733 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 MXD4Q14582 209 aaPredicted RBP10.98□□□□□ -0.65
PMF1-204ENST00000466489 NR1I3Q14994 352 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 MAP9Q49MG5 647 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 ZNF618Q5T7W0 954 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 RRAGBQ5VZM2 374 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 ARMCX5Q6P1M9 558 aa10.98□□□□□ -0.65
PMF1-204ENST00000466489 PADI6Q6TGC4 694 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms