RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 POLD4Q9HCU8 107 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 ADGRA3Q8IWK6 1321 aa22.49■■□□□ 1.19
SKA3-205ENST00000465471 LRRIQ4A6NIV6 560 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 MYOGP15173 224 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
SKA3-205ENST00000465471 HOXA11P31270 313 aaPredicted RBP22.48■■□□□ 1.19
SKA3-205ENST00000465471 PPP4R3CPQ6ZMV5 832 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 GPBP1Q86WP2 473 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 NPAS4Q8IUM7 802 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 SP7Q8TDD2 431 aaPredicted RBP22.48■■□□□ 1.19
SKA3-205ENST00000465471 TIFAQ96CG3 184 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 CCDC113Q9H0I3 377 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 MSRAQ9UJ68 235 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 ODF2LQ9ULJ1 636 aa22.48■■□□□ 1.19
SKA3-205ENST00000465471 CDH23Q9H251 3354 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 TLL1O43897 1013 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 TSPAN1O60635 241 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 FAM187BQ17R55 369 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 IFT74Q96LB3 600 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 REEP2Q9BRK0 252 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 C2orf40Q9H1Z8 148 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 FZD8Q9H461 694 aa22.47■■□□□ 1.19
SKA3-205ENST00000465471 PIN4Q9Y237 131 aaKnown RBP22.47■■□□□ 1.19
SKA3-205ENST00000465471 CHD7Q9P2D1 2997 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 NPHP3-ACAD11A0A0J9YXS1 232 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 INO80B-WBP1J3KQ70 363 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 CA3P07451 260 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 ZSCAN20P17040 1043 aaPredicted RBP22.46■■□□□ 1.19
SKA3-205ENST00000465471 STAT6P42226 847 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 NPTX2P47972 431 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 ZNF131P52739 623 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 RAD51AP2Q09MP3 1159 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 ADALQ6DHV7 355 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 FAM117BQ6P1L5 589 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 ZBTB8OSQ8IWT0 167 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 ZNF689Q96CS4 500 aaPredicted RBP22.46■■□□□ 1.19
SKA3-205ENST00000465471 PRIMPOLQ96LW4 560 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 NTPCRQ9BSD7 190 aaKnown RBP22.46■■□□□ 1.19
SKA3-205ENST00000465471 ZBED2Q9BTP6 218 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 NKX2-4Q9H2Z4 354 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 TTYH1Q9H313 450 aaPredicted RBP22.46■■□□□ 1.19
SKA3-205ENST00000465471 ELAC1Q9H777 363 aaKnown RBP22.46■■□□□ 1.19
SKA3-205ENST00000465471 DACT1Q9NYF0 836 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 INSL6Q9Y581 213 aa22.46■■□□□ 1.19
SKA3-205ENST00000465471 A0A0U1RQF3 1178 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 LCHNA4D1U4 455 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 DGKIO75912 1065 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 ARHGEF15O94989 841 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 UPP2O95045 317 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 PLS3P13797 630 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 AXLP30530 894 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 GIT2Q14161 759 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 DHX8Q14562 1220 aaKnown RBP22.45■■□□□ 1.18
SKA3-205ENST00000465471 ZNF598Q86UK7 904 aaKnown RBP22.45■■□□□ 1.18
SKA3-205ENST00000465471 PDILTQ8N807 584 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 DEPTORQ8TB45 409 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 SPIRE2Q8WWL2 714 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 KCNN1Q92952 543 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 KIFC3Q9BVG8 833 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 PANK2Q9BZ23 570 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 CUEDC2Q9H467 287 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 TSHZ2Q9NRE2 1034 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 PRMT7Q9NVM4 692 aaPredicted RBP22.45■■□□□ 1.18
SKA3-205ENST00000465471 TMEM161AQ9NX61 479 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 ARHGAP28Q9P2N2 729 aa22.45■■□□□ 1.18
SKA3-205ENST00000465471 FNDC1Q4ZHG4 1894 aaPredicted RBP22.45■■□□□ 1.18
SKA3-205ENST00000465471 ERLIN2O94905 339 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 STAG3L1P0CL83 205 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 ATF7P17544 494 aaPredicted RBP22.44■■□□□ 1.18
SKA3-205ENST00000465471 EFNA5P52803 228 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 PEX3P56589 373 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 CACNB1Q02641 598 aaPredicted RBP22.44■■□□□ 1.18
SKA3-205ENST00000465471 DMP1Q13316 513 aaPredicted RBP22.44■■□□□ 1.18
SKA3-205ENST00000465471 ECHDC2Q86YB7 292 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 CCDC51Q96ER9 411 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 RNF216Q9NWF9 866 aaPredicted RBP22.44■■□□□ 1.18
SKA3-205ENST00000465471 CNTNAP2Q9UHC6 1331 aa22.44■■□□□ 1.18
SKA3-205ENST00000465471 PHLPP2Q6ZVD8 1323 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 FAM237AA0A1B0GTK4 181 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 MYMKA6NI61 221 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 SFI1A8K8P3 1242 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 B4GALT5O43286 388 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 EDN1P05305 212 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 ARF4P18085 180 aaPredicted RBP22.43■■□□□ 1.18
SKA3-205ENST00000465471 CMA1P23946 247 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 UBXN11Q5T124 520 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 ZNF697Q5TEC3 545 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 SV2BQ7L1I2 683 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 YME1L1Q96TA2 773 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 FAM13BQ9NYF5 915 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 HPSEQ9Y251 543 aa22.43■■□□□ 1.18
SKA3-205ENST00000465471 RBM19Q9Y4C8 960 aaKnown RBP22.43■■□□□ 1.18
SKA3-205ENST00000465471 A0A1W2PQ27 194 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 A0A1W2PQ64 194 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 A0A1W2PQD8 194 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 ZNF623O75123 536 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 RAB27AP51159 221 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 TAP1Q03518 808 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 MAPK6Q16659 721 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 TWF2Q6IBS0 349 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms