RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 NCOR1O75376 2440 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 MEIS3P2A8K0S8 358 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 USO1O60763 962 aaKnown RBP21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 LYPLA2O95372 231 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 OR52Z1P0C646 297 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 SKIP12755 728 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 SSTR3P32745 418 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 TECP42680 631 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 ERVFC1P60507 584 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 NBR1Q14596 966 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 PLPP4Q5VZY2 271 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 FAM178BQ8IXR5 827 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 MRPL9Q9BYD2 267 aaKnown RBP21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 CD320Q9NPF0 282 aa21.47■■□□□ 1.03
CCHCR1-210ENST00000464012 PER2O15055 1255 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ASAP2O43150 1006 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ST18O60284 1047 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ERLIN2O94905 339 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 RARRES1P49788 294 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 RAB27AP51159 221 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ADAM15Q13444 863 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ASAP3Q8TDY4 903 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 MRPS27Q92552 414 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 TRAIPQ9BWF2 469 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 TLE6Q9H808 572 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 ENTPD7Q9NQZ7 604 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 NOL7Q9UMY1 257 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 FAM50BQ9Y247 325 aa21.46■■□□□ 1.03
CCHCR1-210ENST00000464012 TDRD15B5MCY1 1934 aaKnown RBP21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 NT5C1B-RDH14C9J2C7 533 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 ZC3H11AO75152 810 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 MED24O75448 989 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 DGAT1O75907 488 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 PPM1AP35813 382 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 PLCB3Q01970 1234 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 MAEAQ7L5Y9 396 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 EFHBQ8N7U6 833 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 KHSRPQ92945 711 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 TCF25Q9BQ70 676 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 SPG21Q9NZD8 308 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 PUF60Q9UHX1 559 aaKnown RBP21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 CD207Q9UJ71 328 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 BARX2Q9UMQ3 279 aaPredicted RBP21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 PCDHB2Q9Y5E7 798 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 MUC3AQ02505 3323 aa21.45■■□□□ 1.02
CCHCR1-210ENST00000464012 MBTPS2O43462 519 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 SPATA31C1P0DKV0 1188 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 CA8P35219 290 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 BCAR1P56945 870 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 KRT17Q04695 432 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 RNASELQ05823 741 aaKnown RBP21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 CAPSQ13938 189 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 TFDP1Q14186 410 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 MXD4Q14582 209 aaPredicted RBP21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 POTEGQ6S5H5 508 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 GLB1LQ6UWU2 654 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 CATSPER3Q86XQ3 398 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 GJD3Q8N144 294 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 PGBD4Q96DM1 585 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 GBP3Q9H0R5 595 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 POLR3FQ9H1D9 316 aaPredicted RBP21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 TUFT1Q9NNX1 390 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 LZTS1Q9Y250 596 aa21.44■■□□□ 1.02
CCHCR1-210ENST00000464012 INO80B-WBP1J3KQ70 363 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 FSCN2O14926 492 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 GLP2RO95838 553 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 RBM10P98175 930 aaKnown RBP21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 ORC2Q13416 577 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 NOMO2Q5JPE7 1267 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 SLC39A11Q8N1S5 342 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 ERMNQ8TAM6 284 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 CPB2Q96IY4 423 aa21.43■■□□□ 1.02
CCHCR1-210ENST00000464012 TSPAN1O60635 241 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 CD2BP2O95400 341 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 GLRA2P23416 452 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 HOXA11P31270 313 aaPredicted RBP21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 ALDH7A1P49419 539 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 PTENP60484 403 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 SMAD4Q13485 552 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 PDE12Q6L8Q7 609 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 AGMOQ6ZNB7 445 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 TMC7Q7Z402 723 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 EPHX3Q9H6B9 360 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 GPRC5CQ9NQ84 441 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 TBC1D13Q9NVG8 400 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 CLEC1BQ9P126 229 aa21.42■■□□□ 1.02
CCHCR1-210ENST00000464012 HIDE1A8MVS5 230 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 ZNF623O75123 536 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 OFD1O75665 1012 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 ARL2P36404 184 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 TRAPPC10P48553 1259 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 DUSP6Q16828 381 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 MCTP1Q6DN14 999 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 URGCPQ8TCY9 931 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 TMEM169Q96HH4 297 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 MSLNLQ96KJ4 702 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 POLR3CQ9BUI4 534 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms