RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 GUCY2CP25092 1073 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 GATMP50440 423 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 DNM1Q05193 864 aaKnown RBP19.6■□□□□ 0.73
VPS52-214ENST00000463486 TFDP1Q14186 410 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 STK38Q15208 465 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 NAALADL2Q58DX5 795 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 UBXN11Q5T124 520 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 ATL3Q6DD88 541 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 CATSPER4Q7RTX7 472 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 YME1L1Q96TA2 773 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 FZD8Q9H461 694 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 TMEM161AQ9NX61 479 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
VPS52-214ENST00000463486 RCOR1Q9UKL0 485 aa19.6■□□□□ 0.73
VPS52-214ENST00000463486 ADGRA3Q8IWK6 1321 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 A0A087X0B3 334 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 HIP1RO75146 1068 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 ZSCAN20P17040 1043 aaPredicted RBP19.59■□□□□ 0.73
VPS52-214ENST00000463486 ERVK-21P61565 698 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 ADGRE1Q14246 886 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 PCBP1Q15365 356 aaKnown RBP eCLIP19.59■□□□□ 0.73
VPS52-214ENST00000463486 ECHDC2Q86YB7 292 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 KIFAP3Q92845 792 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 CALML4Q96GE6 196 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 CCDC113Q9H0I3 377 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 PRDM12Q9H4Q4 367 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 CERS4Q9HA82 394 aa19.59■□□□□ 0.73
VPS52-214ENST00000463486 TTLL13PA6NNM8 815 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 ZNF623O75123 536 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 EDN1P05305 212 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 STAG3L1P0CL83 205 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 NAMPTP43490 491 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 MYLIPQ8WY64 445 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 RAD54LQ92698 747 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 CDK5RAP3Q96JB5 506 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 PIN4Q9Y237 131 aaKnown RBP19.58■□□□□ 0.72
VPS52-214ENST00000463486 PCDHB7Q9Y5E2 793 aa19.58■□□□□ 0.72
VPS52-214ENST00000463486 REV3LO60673 3130 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 NPHP3-ACAD11A0A0J9YXS1 232 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 LRRIQ4A6NIV6 560 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 INO80B-WBP1J3KQ70 363 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 B4GALT5O43286 388 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 LPXNO60711 386 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 FGFR1P11362 822 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 MCM6Q14566 821 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 FAM187BQ17R55 369 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 SHC4Q6S5L8 630 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 MRPL10Q7Z7H8 261 aaKnown RBP19.57■□□□□ 0.72
VPS52-214ENST00000463486 CLP1Q92989 425 aaKnown RBP19.57■□□□□ 0.72
VPS52-214ENST00000463486 NTPCRQ9BSD7 190 aaKnown RBP19.57■□□□□ 0.72
VPS52-214ENST00000463486 C17orf80Q9BSJ5 609 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 KIFC3Q9BVG8 833 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 TIPINQ9BVW5 301 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 KCND2Q9NZV8 630 aa19.57■□□□□ 0.72
VPS52-214ENST00000463486 SPTBN5Q9NRC6 3674 aaKnown RBP19.56■□□□□ 0.72
VPS52-214ENST00000463486 SFI1A8K8P3 1242 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 RFXAPO00287 272 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 EOMESO95936 686 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 SSBP05455 408 aaKnown RBP eCLIP19.56■□□□□ 0.72
VPS52-214ENST00000463486 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
VPS52-214ENST00000463486 NPTX2P47972 431 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 RAD51AP2Q09MP3 1159 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 CMTR2Q8IYT2 770 aaKnown RBP19.56■□□□□ 0.72
VPS52-214ENST00000463486 CASD1Q96PB1 797 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 TGS1Q96RS0 853 aaKnown RBP19.56■□□□□ 0.72
VPS52-214ENST00000463486 FAM105AQ9NUU6 356 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 PCDHA7Q9UN72 937 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 STXBP5LQ9Y2K9 1186 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 PRUNE2Q8WUY3 3088 aa19.56■□□□□ 0.72
VPS52-214ENST00000463486 A0A1B0GUA9 196 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 MEIS3P2A8K0S8 358 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 CUTAO60888 179 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 AXLP30530 894 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 PPP2R5AQ15172 486 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 FNDC1Q4ZHG4 1894 aaPredicted RBP19.55■□□□□ 0.72
VPS52-214ENST00000463486 TWF2Q6IBS0 349 aaKnown RBP19.55■□□□□ 0.72
VPS52-214ENST00000463486 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 FIBCD1Q8N539 461 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 KCNG4Q8TDN1 519 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 ARNTL2Q8WYA1 636 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 CPB2Q96IY4 423 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 PANK2Q9BZ23 570 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 ARHGAP28Q9P2N2 729 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 LRFN2Q9ULH4 789 aa19.55■□□□□ 0.72
VPS52-214ENST00000463486 MRPL42Q9Y6G3 142 aaKnown RBP19.55■□□□□ 0.72
VPS52-214ENST00000463486 POU3F3P20264 500 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 IBSPP21815 317 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 ZNF131P52739 623 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 PEX3P56589 373 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 GIT2Q14161 759 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 BTG3Q14201 252 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 E2F4Q16254 413 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 EPC2Q52LR7 807 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 LRRC55Q6ZSA7 311 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 GPBP1Q86WP2 473 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms