RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 GOLGA8IPA6NC78 632 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 GOLGA8JA6NMD2 632 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 DGAT1O75907 488 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 ADRB2P07550 413 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CTAGE8P0CG41 777 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CNGA1P29973 690 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 SNRPFP62306 86 aaKnown RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 IRX3P78415 501 aaPredicted RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 MYL7Q01449 175 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 NAB2Q15742 525 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 SLC39A4Q6P5W5 647 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 INTS8Q75QN2 995 aaKnown RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 CTAGE6Q86UF2 777 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CTAGE4Q8IX94 777 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 RNF10Q8N5U6 811 aaKnown RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 FAM53CQ9NYF3 392 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 RBPJLQ9UBG7 517 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 NAGPAQ9UK23 515 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 MAFBQ9Y5Q3 323 aaPredicted RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 BZW2Q9Y6E2 419 aaKnown RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 IGKV6D-21A0A0A0MT36 114 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 GSTTP1A0A1W2PQM5 241 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 F8VZ95 297 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 GFPT2O94808 682 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 ZRANB2O95218 330 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSH5-211ENST00000463144 KRT13P13646 458 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 SMTNP53814 917 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 DMP1Q13316 513 aaPredicted RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 PPIL2Q13356 520 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 MTERF2Q49AM1 385 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 XKR3Q5GH77 459 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 GPAT2Q6NUI2 795 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 DPY19L2Q6NUT2 758 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 TAS1R3Q7RTX0 852 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 MSANTD4Q8NCY6 345 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
MSH5-211ENST00000463144 OPTNQ96CV9 577 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CAPZA3Q96KX2 299 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 FGD4Q96M96 766 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 PNKPQ96T60 521 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 PCYT2Q99447 389 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 STK33Q9BYT3 514 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 SNX12Q9UMY4 172 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 AGTPBP1Q9UPW5 1226 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSH5-211ENST00000463144 MAPK13O15264 365 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 NCK2O43639 380 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 EVI5O60447 810 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 SEC31AO94979 1220 aaKnown RBP11.06□□□□□ -0.64
MSH5-211ENST00000463144 UBA1P22314 1058 aaKnown RBP11.06□□□□□ -0.64
MSH5-211ENST00000463144 SOX5P35711 763 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 GJA5P36382 358 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 STAT1P42224 750 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 GCLMP48507 274 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 CREG2Q8IUH2 290 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 MCPH1Q8NEM0 835 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 HVCN1Q96D96 273 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 CEP89Q96ST8 783 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 ZNF302Q9NR11 478 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 APEX2Q9UBZ4 518 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
MSH5-211ENST00000463144 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 PRLRP16471 622 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 FERP16591 822 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 NF2P35240 595 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 RTP1P59025 263 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 ARHGEF19Q8IW93 802 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 COG1Q8WTW3 980 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 SAAL1Q96ER3 474 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 NOX5Q96PH1 765 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 SYT11Q9BT88 431 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 TLR10Q9BXR5 811 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 POLR3FQ9H1D9 316 aaPredicted RBP11.06□□□□□ -0.64
MSH5-211ENST00000463144 ATP6V0A4Q9HBG4 840 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
MSH5-211ENST00000463144 FOXN3O00409 490 aaPredicted RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 OATP04181 439 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 PGK2P07205 417 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 CBX1P83916 185 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 SNRNP35Q16560 246 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 CC2D1AQ6P1N0 951 aaPredicted RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 NFRKBQ6P4R8 1299 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 TXLNBQ8N3L3 684 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 SLC30A5Q8TAD4 765 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 ALS2CR12Q96Q35 445 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 LUC7LQ9NQ29 371 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 ARGLU1Q9NWB6 273 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms