RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 B4GALT4O60513 344 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 GCNT3O95395 438 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 SRGAP2CP0DJJ0 459 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
COL6A1-202ENST00000463060 NLRP11P59045 1033 aaKnown RBP15.8■□□□□ 0.12
COL6A1-202ENST00000463060 TFDP1Q14186 410 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 ZCWPW2Q504Y3 356 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 L1TD1Q5T7N2 865 aaKnown RBP15.8■□□□□ 0.12
COL6A1-202ENST00000463060 ZNF410Q86VK4 478 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 RNF149Q8NC42 400 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 MAP7D2Q96T17 732 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 FDXACB1Q9BRP7 624 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-202ENST00000463060 FAM49AQ9H0Q0 323 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-202ENST00000463060 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 CDHR5Q9HBB8 845 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 TBX20Q9UMR3 447 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 AKT3Q9Y243 479 aa15.8■□□□□ 0.12
COL6A1-202ENST00000463060 ZMYM2Q9UBW7 1377 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 DENND3A2RUS2 1198 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 H0YCG3 227 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 TGFB1I1O43294 461 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
COL6A1-202ENST00000463060 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 CCNE1P24864 410 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 ABCD1P33897 745 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 ZNF165P49910 485 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 EFNA5P52803 228 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 RBL2Q08999 1139 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 MGAT3Q09327 533 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 NCAPHQ15003 741 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 KNOP1Q1ED39 458 aaKnown RBP15.79■□□□□ 0.12
COL6A1-202ENST00000463060 TTI2Q6NXR4 508 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 STXBP4Q6ZWJ1 553 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 ANKRD33Q7Z3H0 272 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 MAP4K3Q8IVH8 894 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 DEPTORQ8TB45 409 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 PAWRQ96IZ0 340 aaKnown RBP15.79■□□□□ 0.12
COL6A1-202ENST00000463060 DUSP9Q99956 384 aaKnown RBP15.79■□□□□ 0.12
COL6A1-202ENST00000463060 C2orf40Q9H1Z8 148 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 IKZF4Q9H2S9 585 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 FZD8Q9H461 694 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 CBX8Q9HC52 389 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 DACH1Q9UI36 760 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 TRAF3IP3Q9Y228 551 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 SIP14410 1827 aa15.79■□□□□ 0.12
COL6A1-202ENST00000463060 K7ERI5 159 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 PDXKO00764 312 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 PSMA7O14818 248 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 KIF20AO95235 890 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 PIGRP01833 764 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 EDN1P05305 212 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 STIM1Q13586 685 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 AMHR2Q16671 573 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 FAM187BQ17R55 369 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 KIZQ2M2Z5 673 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 FAM26DQ5JW98 314 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 TRAF7Q6Q0C0 670 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 SRGAP1Q7Z6B7 1085 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 ENOX1Q8TC92 643 aaKnown RBP15.78■□□□□ 0.12
COL6A1-202ENST00000463060 TMEM174Q8WUU8 243 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 P2RX5Q93086 422 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 ZNF668Q96K58 619 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-202ENST00000463060 NLRP4Q96MN2 994 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 TOX2Q96NM4 488 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 ACCSQ96QU6 501 aa15.78■□□□□ 0.12
COL6A1-202ENST00000463060 IKBKBO14920 756 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 CAND2O75155 1236 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 CHRNA1P02708 482 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 EN2P19622 333 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 CRYBB1P53674 252 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 MRPS6P82932 125 aaKnown RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 MBTD1Q05BQ5 628 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 PAK1Q13153 545 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 KLHL10Q6JEL2 608 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 ZC3H3Q8IXZ2 948 aaKnown RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 FAM200AQ8TCP9 573 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 CELF4Q9BZC1 486 aaKnown RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 NAT10Q9H0A0 1025 aaKnown RBP15.77■□□□□ 0.12
COL6A1-202ENST00000463060 RBSNQ9H1K0 784 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 TMEM206Q9H813 350 aa15.77■□□□□ 0.12
COL6A1-202ENST00000463060 PHLPP2Q6ZVD8 1323 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 TRIM49BA6NDI0 452 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 TTLL13PA6NNM8 815 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
COL6A1-202ENST00000463060 PHKA2P46019 1235 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 STX17P56962 302 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
COL6A1-202ENST00000463060 LRRC63Q05C16 580 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 NFIL3Q16649 462 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms