RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
RBM39-223ENST00000463004 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
RBM39-223ENST00000463004 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
RBM39-223ENST00000463004 COL18A1P39060 1754 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 NMT1P30419 496 aaKnown RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 ALDH3A1P30838 453 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 GCLMP48507 274 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 FCGRTP55899 365 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 HERVK_113P62684 666 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 PPP1R21Q6ZMI0 780 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 ADAMTS1Q9UHI8 967 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 GARTP22102 1010 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 METTL7BQ6UX53 244 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 NAMPTP43490 491 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 CBX1P83916 185 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 FUT2Q10981 343 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 BZW1Q7L1Q6 419 aaKnown RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 A6NJR5 290 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 MESDQ14696 234 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 RNF149Q8NC42 400 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 ACRBPQ8NEB7 543 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 MTMR9Q96QG7 549 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 NACA2Q9H009 215 aa12.66□□□□□ -0.38
RBM39-223ENST00000463004 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
RBM39-223ENST00000463004 ZC3H11AO75152 810 aaKnown RBP eCLIP12.65□□□□□ -0.383e-13■■■■□ 20.9
RBM39-223ENST00000463004 FMO5P49326 533 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
RBM39-223ENST00000463004 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 CCDC25Q86WR0 208 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 RUBCNQ92622 972 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 EMSYQ7Z589 1322 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 EXTL3O43909 919 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 PHBP35232 272 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 PGM5Q15124 567 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
RBM39-223ENST00000463004 ZFPM1Q8IX07 1006 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 SYNGAP1Q96PV0 1343 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 TMEM8AQ9HCN3 771 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.38
RBM39-223ENST00000463004 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 TEX33O43247 280 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 GRIN1Q05586 938 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 ZNF677Q86XU0 584 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 THEM5Q8N1Q8 247 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
RBM39-223ENST00000463004 INTUQ9ULD6 942 aa12.65□□□□□ -0.38
RBM39-223ENST00000463004 GRID2IPA4D2P6 1211 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 ANKS4BQ8N8V4 417 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 OPTNQ96CV9 577 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 APOL6Q9BWW8 343 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 MED4Q9NPJ6 270 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 HUS1O60921 280 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 MED24O75448 989 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 RWDD2BP57060 319 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 ELMSAN1Q6PJG2 1045 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 RBM41Q96IZ5 413 aaKnown RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 ACAP3Q96P50 834 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 SENP7Q9BQF6 1050 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 CCDC151A5D8V7 595 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 WTIPA6NIX2 430 aaPredicted RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 CDK17Q00537 523 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 TOGARAM2Q6ZUX3 1019 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 SH3RF1Q7Z6J0 888 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 GIT2Q14161 759 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 DENND2CQ68D51 928 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 SESTD1Q86VW0 696 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 ADAM22Q9P0K1 906 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms