RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 PCDHA7Q9UN72 937 aa8.57□□□□□ -1.04
USP4-207ENST00000462673 COL4A3BPQ9Y5P4 624 aa8.57□□□□□ -1.04
USP4-207ENST00000462673 CDY2AQ9Y6F7 541 aa8.57□□□□□ -1.04
USP4-207ENST00000462673 A0A1W2PQ27 194 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 A0A1W2PQ64 194 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 A0A1W2PQD8 194 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 E9PMD0 336 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 KINO60870 393 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 CXCL10P02778 98 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 AMHP03971 560 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 MYL1P05976 194 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 SRGAP2CP0DJJ0 459 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 GUCY2CP25092 1073 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 AXLP30530 894 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 MAGEA10P43363 369 aaPredicted RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 LAMTOR4Q0VGL1 99 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 NFX1Q12986 1120 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 PAK2Q13177 524 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 DMP1Q13316 513 aaPredicted RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 IQCB1Q15051 598 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 KMT5BQ4FZB7 885 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 TEX35Q5T0J7 233 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 PLA2G4FQ68DD2 849 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 RUFY4Q6ZNE9 571 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 STXBP4Q6ZWJ1 553 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 FILIP1Q7Z7B0 1213 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 DEFB128Q7Z7B8 93 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 TDHQ8IZJ6 230 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 CCAR2Q8N163 923 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 LRRC71Q8N4P6 559 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 RSPH1Q8WYR4 309 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 LARP4BQ92615 738 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 CCDC47Q96A33 483 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 EPSTI1Q96J88 318 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 CLIC6Q96NY7 704 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 GDF15Q99988 308 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 NFKBIZQ9BYH8 718 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 IFIH1Q9BYX4 1025 aaKnown RBP8.56□□□□□ -1.04
USP4-207ENST00000462673 KCNH3Q9ULD8 1083 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 ODF2LQ9ULJ1 636 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 SLC4A7Q9Y6M7 1214 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 BRCA2P51587 3418 aa8.56□□□□□ -1.04
USP4-207ENST00000462673 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 DENND3A2RUS2 1198 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 PP2D1A8MPX8 630 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 K7ERI5 159 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 ZBTB39O15060 712 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 USO1O60763 962 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 TBCAO75347 108 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 GPR32O75388 356 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 NR1I2O75469 434 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 ERLIN2O94905 339 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CHRNA1P02708 482 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 VTNP04004 478 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CTSHP09668 335 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 STAG3L1P0CL83 205 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 SKILP12757 684 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 H2AFXP16104 143 aaPredicted RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 PLCG1P19174 1290 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 ARL2P36404 184 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 NAMPTP43490 491 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 GPC3P51654 580 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CLCN3P51790 818 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 TMEM62Q0P6H9 643 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 GRB10Q13322 594 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 HIC1Q14526 733 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 KARSQ15046 597 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 KIZQ2M2Z5 673 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 PLEKHG4Q58EX7 1191 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 FBXO47Q5MNV8 452 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 RINT1Q6NUQ1 792 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 ZNF365Q70YC5 407 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 HACE1Q8IYU2 909 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 TXLNBQ8N3L3 684 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 RNF149Q8NC42 400 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CNNM3Q8NE01 707 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 DEPTORQ8TB45 409 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 PPP1R13LQ8WUF5 828 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 HERVK_113Q902F9 699 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 DHX38Q92620 1227 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 RAD54LQ92698 747 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 TMEM143Q96AN5 459 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 SCLYQ96I15 445 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 NLRP4Q96MN2 994 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 CEP89Q96ST8 783 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 PLIN2Q99541 437 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 NTPCRQ9BSD7 190 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 MMTAG2Q9BU76 263 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 SRRTQ9BXP5 876 aaKnown RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 C1orf112Q9NSG2 853 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 WRAP73Q9P2S5 460 aaPredicted RBP8.55□□□□□ -1.04
USP4-207ENST00000462673 DOCK5Q9H7D0 1870 aa8.55□□□□□ -1.04
USP4-207ENST00000462673 A0A087WZ62 844 aa8.54□□□□□ -1.04
USP4-207ENST00000462673 CARNS1A5YM72 827 aa8.54□□□□□ -1.04
USP4-207ENST00000462673 CCDC169A6NNP5 214 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms