RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
VAMP7-203ENST00000460621 CHST12Q9NRB3 414 aa12.28□□□□□ -0.44
VAMP7-203ENST00000460621 FAM105AQ9NUU6 356 aa12.28□□□□□ -0.44
VAMP7-203ENST00000460621 FAM86C1Q9NVL1 165 aa12.28□□□□□ -0.44
VAMP7-203ENST00000460621 USP34Q70CQ2 3546 aa12.28□□□□□ -0.44
VAMP7-203ENST00000460621 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 DEXIO95424 95 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 CTDNEP1O95476 244 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 BRD1O95696 1058 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 ASGR2P07307 311 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 HOXB8P17481 243 aaPredicted RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 AVPR2P30518 371 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 PPM1AP35813 382 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 SLC11A1P49279 550 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 SCRN1Q12765 414 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 SMC1AQ14683 1233 aaKnown RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 RARS2Q5T160 578 aaKnown RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 KREMEN2Q8NCW0 462 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 CASP10Q92851 521 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 TMEM143Q96AN5 459 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 PHF20Q9BVI0 1012 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 DACT1Q9NYF0 836 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 RGL1Q9NZL6 768 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 PIN4Q9Y237 131 aaKnown RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
VAMP7-203ENST00000460621 ZFHX2Q9C0A1 2572 aaPredicted RBP12.27□□□□□ -0.45
VAMP7-203ENST00000460621 DMDP11532 3685 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 LILRB3O75022 631 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 CTSAP10619 480 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 PSMC5P62195 406 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 SPIRE1Q08AE8 756 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 LETM2Q2VYF4 491 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 NOMO2Q5JPE7 1267 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 TWF2Q6IBS0 349 aaKnown RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 MRPL10Q7Z7H8 261 aaKnown RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 DDX53Q86TM3 631 aaKnown RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 ZNF410Q86VK4 478 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 PRPF31Q8WWY3 499 aaKnown RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
VAMP7-203ENST00000460621 PCDHB2Q9Y5E7 798 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
VAMP7-203ENST00000460621 MYO15AQ9UKN7 3530 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 F8W810 466 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 WNT7AO00755 349 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 REC8O95072 547 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 EFEMP2O95967 443 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
VAMP7-203ENST00000460621 ALDH7A1P49419 539 aaKnown RBP12.25□□□□□ -0.45
VAMP7-203ENST00000460621 PTPN14Q15678 1187 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 CATSPER4Q7RTX7 472 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 TRIM22Q8IYM9 498 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
VAMP7-203ENST00000460621 TMEM169Q96HH4 297 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 RIPOR3Q96MK2 946 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
VAMP7-203ENST00000460621 GBP3Q9H0R5 595 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 XPNPEP1Q9NQW7 623 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 AGPAT5Q9NUQ2 364 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 MIOSQ9NXC5 875 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
VAMP7-203ENST00000460621 A0A087WWV3 80 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 SRGAP2CP0DJJ0 459 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 SFPQP23246 707 aaKnown RBP eCLIP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 QARSP47897 775 aaKnown RBP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 DNM2P50570 870 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 CDC42EP1Q00587 391 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 TMC5Q6UXY8 1006 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 KRT25Q7Z3Z0 450 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 DYDC2Q96IM9 177 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 EIF2AQ9BY44 585 aaKnown RBP12.24□□□□□ -0.45
VAMP7-203ENST00000460621 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 MARCH5Q9NX47 278 aa12.24□□□□□ -0.45
VAMP7-203ENST00000460621 CPLX1O14810 134 aa12.23□□□□□ -0.45
VAMP7-203ENST00000460621 SLITRK3O94933 977 aa12.23□□□□□ -0.45
VAMP7-203ENST00000460621 POMCP01189 267 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms