RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-206ENST00000460235 FAAP100Q0VG06 881 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-206ENST00000460235 CAPSQ13938 189 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 LRRC26Q2I0M4 334 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 COBLL1Q53SF7 1204 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-206ENST00000460235 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 RBM43Q6ZSC3 357 aaKnown RBP13.58□□□□□ -0.24
HDAC4-206ENST00000460235 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
HDAC4-206ENST00000460235 DAW1Q8N136 415 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 ASAP3Q8TDY4 903 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 TSG101Q99816 390 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 CDY2AQ9Y6F7 541 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 A0A087WZ62 844 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 KIAA0391O15091 583 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 SLC16A4O15374 487 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 KLRC4O43908 158 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 GPR32O75388 356 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 PFKMP08237 780 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 DARSP14868 501 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 GTF2BQ00403 316 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 STX1AQ16623 288 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 KYAT1Q16773 422 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 L1TD1Q5T7N2 865 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 GUF1Q8N442 669 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 TMEM161BQ8NDZ6 487 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 APBB2Q92870 758 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 BICD1Q96G01 975 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 DHTKD1Q96HY7 919 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 FDXACB1Q9BRP7 624 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 FTHL17Q9BXU8 183 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 MRPL4Q9BYD3 311 aaKnown RBP13.57□□□□□ -0.24
HDAC4-206ENST00000460235 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 TMEM63CQ9P1W3 806 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
HDAC4-206ENST00000460235 ARID2Q68CP9 1835 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 ACKR2O00590 384 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 TIMP1P01033 207 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 SKIP12755 728 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 NLRP12P59046 1061 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 EHHADHQ08426 723 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 PAK2Q13177 524 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 DRP2Q13474 957 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 MORC3Q14149 939 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 HIC1Q14526 733 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 ZPBP2Q6X784 338 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 TSHZ1Q6ZSZ6 1077 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 ZNF507Q8TCN5 953 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 SEPT8Q92599 483 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 DPF3Q92784 378 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 LBHD1Q9BQE6 289 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 SLC39A2Q9NP94 309 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-206ENST00000460235 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 TBX20Q9UMR3 447 aa13.56□□□□□ -0.24
HDAC4-206ENST00000460235 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-206ENST00000460235 EFCAB14O75071 495 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 PRKCBP05771 671 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 CTSHP09668 335 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 CASP1P29466 404 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 LIG4P49917 911 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 TMEM62Q0P6H9 643 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
HDAC4-206ENST00000460235 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 NOTUMQ6P988 496 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 OSMRQ99650 979 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 GBP3Q9H0R5 595 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 FZD8Q9H461 694 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 IFT122Q9HBG6 1241 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
HDAC4-206ENST00000460235 BIN1O00499 593 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms