RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ELF1P32519 619 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 UBXN1Q04323 297 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 MAPK7Q13164 816 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 ZNF792Q3KQV3 632 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 TRIM7Q9C029 511 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 ZCCHC17Q9NP64 241 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 EIF3DO15371 548 aaKnown RBP eCLIP11.31□□□□□ -0.6
HERC4-207ENST00000460168 AP1G2O75843 785 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 ZNF24P17028 368 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 TCF7P36402 384 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 GRM1Q13255 1194 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 GRB14Q14449 540 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 FAM102BQ5T8I3 360 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 LRRC55Q6ZSA7 311 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 DAW1Q8N136 415 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 SEPT1Q8WYJ6 367 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 K7ENM7 598 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 CALUO43852 315 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 NR2F2P24468 414 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 KCNA1Q09470 495 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 GPS2Q13227 327 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ADAM9Q13443 819 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 E2F5Q15329 346 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 CELF3Q5SZQ8 465 aaKnown RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 FAM160B1Q5W0V3 765 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ARMCX5Q6P1M9 558 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
HERC4-207ENST00000460168 AZI2Q9H6S1 392 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 GPRC5CQ9NQ84 441 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
HERC4-207ENST00000460168 GSTTP1A0A1W2PQM5 241 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 PDXKO00764 312 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 DGAT1O75907 488 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 PLS3P13797 630 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 TMED1Q13445 227 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 MTERF2Q49AM1 385 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 ZNF394Q53GI3 561 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
HERC4-207ENST00000460168 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 FIZ1Q96SL8 496 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 TRPV5Q9NQA5 729 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
HERC4-207ENST00000460168 SLC5A4Q9NY91 659 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 V9GYY5 206 aaPredicted RBP11.3□□□□□ -0.6
HERC4-207ENST00000460168 PCNTO95613 3336 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
HERC4-207ENST00000460168 IGKV6D-21A0A0A0MT36 114 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 TMEM88BA6NKF7 163 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 CETN3O15182 167 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 SH3BP5O60239 455 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 TLR2O60603 784 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 CCDC175P0C221 793 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 HOXD13P35453 343 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 PBX1P40424 430 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 DNM2P50570 870 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 STAT5BP51692 787 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 CCNHP51946 323 aaPredicted RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 GLG1Q92896 1179 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 UBE4BO95155 1302 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 ADGRA2Q96PE1 1338 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 FAM155AB1AL88 458 aaPredicted RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 F8VZ95 297 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 RTN2O75298 545 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms