RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SETD4Q9NVD3 440 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 SLC5A4Q9NY91 659 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 PYCARDQ9ULZ3 195 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 TBX20Q9UMR3 447 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 PTCH2Q9Y6C5 1203 aa9.61□□□□□ -0.87
RIF1-208ENST00000457745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
RIF1-208ENST00000457745 GRIN2DO15399 1336 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 GOLGA8IPA6NC78 632 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 GOLGA8JA6NMD2 632 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 LGALS16A8MUM7 142 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 ABLIM1O14639 778 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 MEFVO15553 781 aaPredicted RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 B4GALT5O43286 388 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 ADCY3O60266 1144 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 HBP1O60381 514 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 SERPINC1P01008 464 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 IQCF3P0C7M6 154 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 NR2F2P24468 414 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 KLRC1P26715 233 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 RFC5P40937 340 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 PSEN2P49810 448 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 CYP2J2P51589 502 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 RTP1P59025 263 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 ADAM17P78536 824 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 PURAQ00577 322 aaKnown RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 LRRC63Q05C16 580 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 IRF5Q13568 498 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 GRIK4Q16099 956 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 CCSAPQ6IQ19 270 aaPredicted RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 FILIP1Q7Z7B0 1213 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 CREBRFQ8IUR6 639 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 MAP4K3Q8IVH8 894 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 TRIM59Q8IWR1 403 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 MCPH1Q8NEM0 835 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 LMBR1Q8WVP7 490 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 PRPF31Q8WWY3 499 aaKnown RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 SAAL1Q96ER3 474 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 FAM167AQ96KS9 214 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 DRC1Q96MC2 740 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 CCDC43Q96MW1 224 aaKnown RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 NTPCRQ9BSD7 190 aaKnown RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 NRBP2Q9NSY0 501 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 ERAP1Q9NZ08 941 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 AJAP1Q9UKB5 411 aaPredicted RBP9.6□□□□□ -0.87
RIF1-208ENST00000457745 FAM184BQ9ULE4 1060 aa9.6□□□□□ -0.87
RIF1-208ENST00000457745 ANK1P16157 1881 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 UBE4BO95155 1302 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 HTTP42858 3142 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 BICDL2A1A5D9 508 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 LRRIQ4A6NIV6 560 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 PDXKO00764 312 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 DKC1O60832 514 aaKnown RBP eCLIP9.59□□□□□ -0.87
RIF1-208ENST00000457745 FKTNO75072 461 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 PPFIA4O75335 1185 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 VTNP04004 478 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 INHAP05111 366 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TRIM49P0CI25 452 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TRIM49CP0CI26 452 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 AKR1A1P14550 325 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 HSPA6P17066 643 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 CDK11BP21127 795 aaKnown RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 FGFR4P22455 802 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 GJA9P57773 515 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 DLG4P78352 724 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TBC1D8BQ0IIM8 1120 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 LAMTOR4Q0VGL1 99 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 KCNMA1Q12791 1236 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 MFSD10Q14728 455 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 FSCN1Q16658 493 aaKnown RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 TPD52L1Q16890 204 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 EDRF1Q3B7T1 1238 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 SEZ6Q53EL9 994 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 EEF1DP3Q658K8 133 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 E4F1Q66K89 784 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 CDCA2Q69YH5 1023 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 EFCAB12Q6NXP0 572 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 CXCL17Q6UXB2 119 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 CDR2LQ86X02 465 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 CBWD2Q8IUF1 395 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 DNAJC5GQ8N7S2 189 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TUBGCP2Q9BSJ2 902 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TIPINQ9BVW5 301 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 TARS2Q9BW92 718 aaKnown RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 TOPORSQ9NS56 1045 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 LARSQ9P2J5 1176 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms