RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MCM4P33991 863 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 MAGEA10P43363 369 aaPredicted RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 AFMP43652 599 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 ASIC1P78348 528 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 TPRNQ4KMQ1 711 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 HERC4Q5GLZ8 1057 aaPredicted RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 FZD8Q9H461 694 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 AGO3Q9H9G7 860 aaKnown RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 ERVK-5Q9HDB9 667 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 PANK4Q9NVE7 773 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 PRMT7Q9NVM4 692 aaPredicted RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 PADI3Q9ULW8 664 aa15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
HMGXB4-204ENST00000455359 ABHD14A-ACY1A0A1B0GW23 586 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 AXLP30530 894 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 CD52P31358 61 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 BMP8BP34820 402 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 NCKAP1LP55160 1127 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 MBTD1Q05BQ5 628 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 ALCAMQ13740 583 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 POSTNQ15063 836 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 MAPK6Q16659 721 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 FAM178BQ8IXR5 827 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 TMEM161BQ8NDZ6 487 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 STAMQ92783 540 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 VWCEQ96DN2 955 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 CCDC51Q96ER9 411 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 GDF15Q99988 308 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 MTIF3Q9H2K0 278 aaKnown RBP15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 ZHX3Q9H4I2 956 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 ST3GAL5Q9UNP4 418 aa15.77■□□□□ 0.12
HMGXB4-204ENST00000455359 WDR81Q562E7 1941 aa15.77■□□□□ 0.11
HMGXB4-204ENST00000455359 SFI1A8K8P3 1242 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 K7ERI5 159 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 ACKR2O00590 384 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 SMC2O95347 1197 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 FGBP02675 491 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 MDM2Q00987 491 aaPredicted RBP15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 EHHADHQ08426 723 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 DPYDQ12882 1025 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 PSMD2Q13200 908 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 CUL4BQ13620 913 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 IKBKEQ14164 716 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 CATSPER4Q7RTX7 472 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 DEFB128Q7Z7B8 93 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 FAM228AQ86W67 206 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 TRAIPQ9BWF2 469 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 CCDC113Q9H0I3 377 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 TCHHQ07283 1943 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 LOXHD1Q8IVV2 1947 aa15.76■□□□□ 0.11
HMGXB4-204ENST00000455359 ERLIN2O94905 339 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 GTF2BQ00403 316 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 COASYQ13057 564 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 KCNB1Q14721 858 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 C16orf59Q7L2K0 433 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 ZNF720Q7Z2F6 126 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 HAUS6Q7Z4H7 955 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 SFR1Q86XK3 245 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 GRAMD1CQ8IYS0 662 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 HERVK_113Q902F9 699 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 ZNF668Q96K58 619 aaPredicted RBP15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 GSDMAQ96QA5 445 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 FIZ1Q96SL8 496 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 BLZF1Q9H2G9 400 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 MINDY3Q9H8M7 445 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 MRPL44Q9H9J2 332 aaKnown RBP15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 POLD4Q9HCU8 107 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 C1orf112Q9NSG2 853 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 AGPAT5Q9NUQ2 364 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 RMND1Q9NWS8 449 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 PCDHB13Q9Y5F0 798 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 ADGRA3Q8IWK6 1321 aa15.75■□□□□ 0.11
HMGXB4-204ENST00000455359 DENND3A2RUS2 1198 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 K7ENM7 598 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 SLC16A4O15374 487 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 KLRC4O43908 158 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 RPN1P04843 607 aaKnown RBP15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 STRN3Q13033 797 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 AMHR2Q16671 573 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 TMEM240Q5SV17 173 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 NOTUMQ6P988 496 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 ZNF365Q70YC5 407 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 KIFC3Q9BVG8 833 aa15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 UBE2OQ9C0C9 1292 aaKnown RBP15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
HMGXB4-204ENST00000455359 EXOC1Q9NV70 894 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms