RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ZNF263O14978 683 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 TRAPPC3O43617 180 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 BUB1O43683 1085 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 GNA14O95837 355 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 KRT14P02533 472 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 FCER1AP12319 257 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 IL4RP24394 825 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 MDH1P40925 334 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 PPP1R2P41236 205 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CFAP221Q4G0U5 840 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 SLC44A4Q53GD3 710 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CCDC84Q86UT8 332 aaPredicted RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ZNF34Q8IZ26 560 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 SH2D3CQ8N5H7 860 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 C4orf32Q8N8J7 132 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CCSER1Q9C0I3 900 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ATAD3AQ9NVI7 634 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 PLAGL2Q9UPG8 496 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 SNX9Q9Y5X1 595 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 A0A1W2PQJ5 194 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ITGA2BP08514 1039 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 PRLRP16471 622 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ATP2A2P16615 1042 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 HALP42357 657 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 RASSF7Q02833 373 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 KLC1Q07866 573 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 RNF187Q5TA31 235 aaPredicted RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CCDC43Q96MW1 224 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 B3GNT4Q9C0J1 378 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 VCXQ9H320 206 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 ARHGAP20Q9P2F6 1191 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 PDP2Q9P2J9 529 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 GTF3C4Q9UKN8 822 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 MYH13Q9UKX3 1938 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 LETM2Q2VYF4 491 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 MREGQ8N565 214 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 GATA6Q92908 595 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 CUEDC2Q9H467 287 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 POLD4Q9HCU8 107 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 RBM12Q9NTZ6 932 aaKnown RBP10.38□□□□□ -0.75
LINC01940-201ENST00000455228 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 MAFFQ9ULX9 164 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 NFU1Q9UMS0 254 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
LINC01940-201ENST00000455228 MYH10P35580 1976 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 MYH3P11055 1940 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 GUCY2DQ02846 1103 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 COX10Q12887 443 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 E2F2Q14209 437 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 FIGNQ5HY92 759 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 LILRB1Q8NHL6 650 aaPredicted RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 HPS3Q969F9 1004 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 GFM2Q969S9 779 aaKnown RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 CALML4Q96GE6 196 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ZIM3Q96PE6 472 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 CARD9Q9H257 536 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 EPB41L5Q9HCM4 733 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 FKBP14Q9NWM8 211 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 LAD1O00515 517 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 CCNT1O60563 726 aaKnown RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ZPR1O75312 459 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 GSTT2P0CG29 244 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 GSTT2BP0CG30 244 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 PAK2Q13177 524 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ITIH4Q14624 930 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 TXNRD1Q16881 649 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 VWA3BQ502W6 1294 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 MIIPQ5JXC2 388 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 SYCP2LQ5T4T6 812 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 NDUFAF5Q5TEU4 345 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 TYW1Q9NV66 732 aaKnown RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 DCAF16Q9NXF7 216 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ADAMTSL3P82987 1691 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 GOLGA6L10A0A0M3HER8 536 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ESYT3A0FGR9 886 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ORC4O43929 436 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 HEXIM1O94992 359 aaKnown RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 WEE1P30291 646 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 RNASE9P60153 205 aaKnown RBP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 EVX2Q03828 476 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 DPYSQ14117 519 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 RNF220Q5VTB9 566 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms