RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 JAK2O60674 1132 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 CLASP2O75122 1294 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 TECP42680 631 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 CTTNQ14247 550 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 EPHA7Q15375 998 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 PDE12Q6L8Q7 609 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 NSUN7Q8NE18 718 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 PRPF31Q8WWY3 499 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 LXNQ9BS40 222 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 ZBP1Q9H171 429 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 ENTPD7Q9NQZ7 604 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 AGPAT5Q9NUQ2 364 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
GPC1-206ENST00000455111 COL4A3BPQ9Y5P4 624 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 HCFC2Q9Y5Z7 792 aa17.98■□□□□ 0.47
GPC1-206ENST00000455111 ZNF623O75123 536 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 DDHD2O94830 711 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 P4HBP07237 508 aaKnown RBP17.97■□□□□ 0.47
GPC1-206ENST00000455111 GALTP07902 379 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
GPC1-206ENST00000455111 TMC7Q7Z402 723 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 C4orf19Q8IY42 314 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 CEP170P1Q96L14 293 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 NGRNQ9NPE2 291 aaKnown RBP17.97■□□□□ 0.47
GPC1-206ENST00000455111 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
GPC1-206ENST00000455111 A0A087WWV3 80 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 TBX3O15119 743 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 SLITRK3O94933 977 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
GPC1-206ENST00000455111 PPM1AP35813 382 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 SLC11A1P49279 550 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 ZXDAP98168 799 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 CYP4A11Q02928 519 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 TWF2Q6IBS0 349 aaKnown RBP17.96■□□□□ 0.47
GPC1-206ENST00000455111 NCAPH2Q6IBW4 605 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 MRPL10Q7Z7H8 261 aaKnown RBP17.96■□□□□ 0.47
GPC1-206ENST00000455111 SMG8Q8ND04 991 aaKnown RBP17.96■□□□□ 0.47
GPC1-206ENST00000455111 FBXL18Q96ME1 805 aa17.96■□□□□ 0.47
GPC1-206ENST00000455111 TDRD15B5MCY1 1934 aaKnown RBP17.96■□□□□ 0.47
GPC1-206ENST00000455111 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 ZC3H11AO75152 810 aaKnown RBP eCLIP17.95■□□□□ 0.46
GPC1-206ENST00000455111 CDKL5O76039 1030 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 WEE2P0C1S8 567 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
GPC1-206ENST00000455111 SP100P23497 879 aaPredicted RBP17.95■□□□□ 0.46
GPC1-206ENST00000455111 YWHABP31946 246 aaKnown RBP17.95■□□□□ 0.46
GPC1-206ENST00000455111 ANAPC15P60006 121 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 LAMTOR4Q0VGL1 99 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 IER5LQ5T953 404 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 TRIM67Q6ZTA4 783 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 C12orf76Q8N812 135 aaPredicted RBP17.95■□□□□ 0.46
GPC1-206ENST00000455111 SLC22A17Q8WUG5 538 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 ASIC4Q96FT7 647 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 IGSF21Q96ID5 467 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 HSD17B14Q9BPX1 270 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 POMKQ9H5K3 350 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
GPC1-206ENST00000455111 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
GPC1-206ENST00000455111 MUC6Q6W4X9 2439 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 SRGAP2CP0DJJ0 459 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 EPCAMP16422 314 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 DNM2P50570 870 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 FOSBP53539 338 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 CDC42EP1Q00587 391 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 SMC1AQ14683 1233 aaKnown RBP17.94■□□□□ 0.46
GPC1-206ENST00000455111 EMC2Q15006 297 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 AMHR2Q16671 573 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 NOMO2Q5JPE7 1267 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 FERMT3Q86UX7 667 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 VPS52Q8N1B4 723 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 PRSS33Q8NF86 280 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 ASAP3Q8TDY4 903 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
GPC1-206ENST00000455111 MRPL9Q9BYD2 267 aaKnown RBP17.94■□□□□ 0.46
GPC1-206ENST00000455111 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 MIOSQ9NXC5 875 aa17.94■□□□□ 0.46
GPC1-206ENST00000455111 TMEM221A6NGB7 291 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 M0R296 226 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 CXCL14O95715 111 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 EFEMP2O95967 443 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 KRT2P35908 639 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 POLGP54098 1239 aaPredicted RBP17.93■□□□□ 0.46
GPC1-206ENST00000455111 KRT17Q04695 432 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 BMP8AQ7Z5Y6 402 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 MTMR9Q96QG7 549 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 PHOX2BQ99453 314 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 EIF2AK1Q9BQI3 630 aaKnown RBP17.93■□□□□ 0.46
GPC1-206ENST00000455111 INO80BQ9C086 356 aaPredicted RBP17.93■□□□□ 0.46
GPC1-206ENST00000455111 SMOC2Q9H3U7 446 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 MARCH5Q9NX47 278 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms