RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SLC16A4O15374 487 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 PIGRP01833 764 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 VTNP04004 478 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 NMT1P30419 496 aaKnown RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 HOXD13P35453 343 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 PRCPP42785 496 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 PHKA2P46019 1235 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 CRYBB1P53674 252 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 KSR1Q8IVT5 923 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 DEPTORQ8TB45 409 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 ABHD8Q96I13 439 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 PRIMPOLQ96LW4 560 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 INO80BQ9C086 356 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 FAM49AQ9H0Q0 323 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-206ENST00000454852 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 TMEM206Q9H813 350 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 NOD1Q9Y239 953 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 GDAQ9Y2T3 454 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 A0A087WZ62 844 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 DENND3A2RUS2 1198 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 LRRIQ4A6NIV6 560 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 GCNT3O95395 438 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 MYBP10242 640 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 DARSP14868 501 aaKnown RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 MBTD1Q05BQ5 628 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 BFSP2Q13515 415 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 STIM1Q13586 685 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 NFIL3Q16649 462 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 ZPBP2Q6X784 338 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 GLIS3Q8NEA6 775 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 FDXACB1Q9BRP7 624 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 GCOM2Q9BZD3 368 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 TBC1D7Q9P0N9 293 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
TRAF4-206ENST00000454852 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 TBX20Q9UMR3 447 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
TRAF4-206ENST00000454852 K7ERI5 159 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 M0QZ92 97 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 ACKR2O00590 384 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 PDXKO00764 312 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 PSMA7O14818 248 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 PARNO95453 639 aaKnown RBP12.37□□□□□ -0.43
TRAF4-206ENST00000454852 CHRNA1P02708 482 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 CKBP12277 381 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 CCNE1P24864 410 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-206ENST00000454852 TLE2Q04725 743 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 LRRC63Q05C16 580 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 MAPK6Q16659 721 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 AMHR2Q16671 573 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 TRIM60Q495X7 471 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-206ENST00000454852 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-206ENST00000454852 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 NLRP4Q96MN2 994 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 ACCSQ96QU6 501 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
TRAF4-206ENST00000454852 RWDD2AQ9UIY3 292 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 ZMYM2Q9UBW7 1377 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
TRAF4-206ENST00000454852 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 PQBP1O60828 265 aaKnown RBP12.36□□□□□ -0.43
TRAF4-206ENST00000454852 PRPF6O94906 941 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms