RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SLC24A5Q71RS6 500 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 GDPD2Q9HCC8 539 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 AGPAT5Q9NUQ2 364 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 FAM13BQ9NYF5 915 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 ODF2LQ9ULJ1 636 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 CMA1P23946 247 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 FAM189BP81408 668 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 GIT2Q14161 759 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 RAB30Q15771 203 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 SV2BQ7L1I2 683 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 REEP2Q9BRK0 252 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 C2orf40Q9H1Z8 148 aa30.93■■■□□ 2.54
SMARCC1-203ENST00000454240 SFI1A8K8P3 1242 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 UPP2O95045 317 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 DNAJB2P25686 324 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 HOXA11P31270 313 aaPredicted RBP30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 NPTX2P47972 431 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 SARSP49591 514 aaKnown RBP30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 PEX3P56589 373 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 AMHR2Q16671 573 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 GPR153Q6NV75 609 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 ZBTB8OSQ8IWT0 167 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 DEPTORQ8TB45 409 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 NTPCRQ9BSD7 190 aaKnown RBP30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 ZBED2Q9BTP6 218 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 FZD8Q9H461 694 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 MSRAQ9UJ68 235 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 PIN4Q9Y237 131 aaKnown RBP30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 YBX2Q9Y2T7 364 aaKnown RBP30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 ADGRA3Q8IWK6 1321 aa30.92■■■□□ 2.54
SMARCC1-203ENST00000454240 TLL1O43897 1013 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 PLS3P13797 630 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 HTRA4P83105 476 aaPredicted RBP30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 CACNB1Q02641 598 aaPredicted RBP30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 FAM117BQ6P1L5 589 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 IQUBQ8NA54 791 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 RAD9AQ99638 391 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 TRAIPQ9BWF2 469 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 CUEDC2Q9H467 287 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 DACT1Q9NYF0 836 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 SZT2Q5T011 3432 aa30.91■■■□□ 2.54
SMARCC1-203ENST00000454240 POLR2DO15514 142 aaKnown RBP30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 TSPAN1O60635 241 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 ERLIN2O94905 339 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 MYOGP15173 224 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 AXLP30530 894 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 DMP1Q13316 513 aaPredicted RBP30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 FAM187BQ17R55 369 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 PPP4R3CPQ6ZMV5 832 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 NPAS4Q8IUM7 802 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 DHX58Q96C10 678 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 KIFC3Q9BVG8 833 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 CCDC113Q9H0I3 377 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 KCNG1Q9UIX4 513 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 KCNH3Q9ULD8 1083 aa30.9■■■□□ 2.54
SMARCC1-203ENST00000454240 MYMKA6NI61 221 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 CCDC169A6NNP5 214 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 ZNF131P52739 623 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 EFNA5P52803 228 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 SPIRE2Q8WWL2 714 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 PRIMPOLQ96LW4 560 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 IPO9Q96P70 1041 aaKnown RBP30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 ELAC1Q9H777 363 aaKnown RBP30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 PRMT7Q9NVM4 692 aaPredicted RBP30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 INSL6Q9Y581 213 aa30.89■■■□□ 2.54
SMARCC1-203ENST00000454240 A0A0U1RQF3 1178 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 FAM237AA0A1B0GTK4 181 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 A0A1W2PQ27 194 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 A0A1W2PQ64 194 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 A0A1W2PQD8 194 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 KRT18P05783 430 aaKnown RBP30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 STAG3L1P0CL83 205 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 DDX12PQ92771 950 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 TIFAQ96CG3 184 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 KMT5AQ9NQR1 393 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 KBTBD4Q9NVX7 518 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 RNF216Q9NWF9 866 aaPredicted RBP30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 LARSQ9P2J5 1176 aaKnown RBP30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 ARHGAP28Q9P2N2 729 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 HPSEQ9Y251 543 aa30.88■■■□□ 2.53
SMARCC1-203ENST00000454240 A0A1B0GVL5 298 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 DGKIO75912 1065 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 ARF4P18085 180 aaPredicted RBP30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 NCBP1Q09161 790 aaKnown RBP30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 MAPK6Q16659 721 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 TWF2Q6IBS0 349 aaKnown RBP30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 DNAJC19Q96DA6 116 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 PYM1Q9BRP8 204 aaKnown RBP30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 TNMDQ9H2S6 317 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 NKX2-4Q9H2Z4 354 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 TMEM161AQ9NX61 479 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 PCDHB7Q9Y5E2 793 aa30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 FNDC1Q4ZHG4 1894 aaPredicted RBP30.87■■■□□ 2.53
SMARCC1-203ENST00000454240 B4GALT5O43286 388 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 PFKFB1P16118 471 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 DYMQ7RTS9 669 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 ECHDC2Q86YB7 292 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 ZNF689Q96CS4 500 aaPredicted RBP30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 TMEM134Q9H6X4 195 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 RC3H2Q9HBD1 1191 aaKnown RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms