RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 KCNQ2O43526 872 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 HSPA4LO95757 839 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 S100BP04271 92 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 ABI1Q8IZP0 508 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 TMEM35BQ8NCS4 154 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 FUT8Q9BYC5 575 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 FCER1AP12319 257 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 PSMA2P25787 234 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 KIAA1586Q9HCI6 787 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 GNGT2O14610 69 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 ORC4O43929 436 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 GYPCP04921 128 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 HIPK4Q8NE63 616 aa12.83□□□□□ -0.35
SEC16A-207ENST00000453963 SKA2Q8WVK7 121 aaPredicted RBP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 XPO6Q96QU8 1125 aaKnown RBP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 NXF1Q9UBU9 619 aaKnown RBP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.35
SEC16A-207ENST00000453963 FAM107AO95990 144 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 CYP2D6P10635 497 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 EEF1B2P24534 225 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 GUCY1A2P33402 732 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 GCLMP48507 274 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 IRX1P78414 480 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 ANO5Q75V66 913 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 GLYCTKQ8IVS8 523 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 ANLNQ9NQW6 1124 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 FHOD1Q9Y613 1164 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 ZNF609O15014 1411 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 KRT10P13645 584 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 SOX5P35711 763 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 WDR93Q6P2C0 686 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 GJD4Q96KN9 370 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 FAM161BQ96MY7 647 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 MRPL40Q9NQ50 206 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 ARHGAP10A1A4S6 786 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 CALB1P05937 261 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 CD58P19256 250 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 CCND2P30279 289 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 TRMT10CQ7L0Y3 403 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 ATP11CQ8NB49 1132 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 PIGOQ8TEQ8 1089 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 LRRC4Q9HBW1 653 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 PCDHA6Q9UN73 950 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
SEC16A-207ENST00000453963 PCDHA8Q9Y5H6 950 aa12.83□□□□□ -0.36
SEC16A-207ENST00000453963 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 POTEB3A0JP26 581 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 WDR64B1ANS9 1081 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 POTECB2RU33 542 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CCDC22O60826 627 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 PYGBP11216 843 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 PEX3P56589 373 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 PDIA5Q14554 519 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 POTEBQ6S5H4 581 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 SYDE1Q6ZW31 735 aaPredicted RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 AGGF1Q8N302 714 aaeCLIP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CEP70Q8NHQ1 597 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 ANGPTL3Q9Y5C1 460 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 MYBL1P10243 752 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 EEPD1Q7L9B9 569 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms