RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MSH2P43246 934 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 COPS2P61201 443 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 LONP2Q86WA8 852 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 ERP27Q96DN0 273 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 BCAS3Q9H6U6 928 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 SYNGAP1Q96PV0 1343 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 ARHGEF35A5YM69 484 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 TTLL1O95922 423 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 FGRP09769 529 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 DHX34Q14147 1143 aaKnown RBP14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 RNF207Q6ZRF8 634 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 RFX8Q6ZV50 586 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 CATSPER3Q86XQ3 398 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 ARL2BPQ9Y2Y0 163 aa14.9□□□□□ -0.02
UBE2D3-210ENST00000453744 H0YGN5 161 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 GHRP10912 638 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 CREB1P16220 341 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 CETN2P41208 172 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 PTENP60484 403 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 ATG4AQ8WYN0 398 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 MCUR1Q96AQ8 359 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 ELMO3Q96BJ8 720 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 INTS2Q9H0H0 1204 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.036e-9■□□□□ 11.3
UBE2D3-210ENST00000453744 NFS1Q9Y697 457 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 PHF2O75151 1096 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 IL9RQ01113 521 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 MTM1Q13496 603 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 VPS52Q8N1B4 723 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 SLC20A1Q8WUM9 679 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 NUDCD1Q96RS6 583 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 MTFR1LQ9H019 292 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 DCTN4Q9UJW0 460 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 K7ENM7 598 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 TARSP26639 723 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 ARHGAP4P98171 946 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 KRT17Q04695 432 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 COG2Q14746 738 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 NFIXQ14938 502 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 CCDC174Q6PII3 467 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 GBP7Q8N8V2 638 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 RUSC1Q9BVN2 902 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 CARD9Q9H257 536 aa14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-210ENST00000453744 LMTK3Q96Q04 1460 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 FOXN3O00409 490 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 CACNB3P54284 484 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 DNAJC3Q13217 504 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 SLC51AQ86UW1 340 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 SLC30A5Q8TAD4 765 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 LRRC8CQ8TDW0 803 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 ALG3Q92685 438 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 HAS1Q92839 578 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 NAP1L4Q99733 375 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 TTC7AQ9ULT0 858 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 RGPD5Q99666 1765 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 M0R2N6 131 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 ZBTB5O15062 677 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 KRT16P08779 473 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 CA4P22748 312 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 CCND1P24385 295 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 PSEN1P49768 467 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 ITIH4Q14624 930 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 ZYXQ15942 572 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 STMN2Q93045 179 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 TMEM237Q96Q45 408 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 TSC22D3Q99576 134 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 SERPINA10Q9UK55 444 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 PDXKO00764 312 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 LUC7L3O95232 432 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 FMO5P49326 533 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 GPC5P78333 572 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 SLFN13Q68D06 897 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 RHOT2Q8IXI1 618 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 SCYL3Q8IZE3 742 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 LRRC57Q8N9N7 239 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 LNX1Q8TBB1 728 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 CDC42EP4Q9H3Q1 356 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 AJAP1Q9UKB5 411 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 MYO5AQ9Y4I1 1855 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-210ENST00000453744 PPP1R12AO14974 1030 aaPredicted RBP14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 SNX3O60493 162 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 TMEM253P0C7T8 217 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 ECHS1P30084 290 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 RBBP5Q15291 538 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 PWWP2AQ96N64 755 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 ACP6Q9NPH0 428 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
UBE2D3-210ENST00000453744 HAO1Q9UJM8 370 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms