RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 C9orf50Q5SZB4 431 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 TRIM9Q9C026 710 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
RBM39-219ENST00000453310 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
RBM39-219ENST00000453310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.3■□□□□ 0.36
RBM39-219ENST00000453310 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 INO80B-WBP1J3KQ70 363 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 BAIAP3O94812 1187 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 IDEP14735 1019 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 LIG1P18858 919 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 SNW1Q13573 536 aaKnown RBP17.3■□□□□ 0.36
RBM39-219ENST00000453310 IKBKEQ14164 716 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 SHHQ15465 462 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 CNNM4Q6P4Q7 775 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 GRAMD1CQ8IYS0 662 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 ENGASEQ8NFI3 743 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 SPIRE2Q8WWL2 714 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 HERVK_113Q902F9 699 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 C7orf25Q9BPX7 421 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 TMX1Q9H3N1 280 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 KCNG1Q9UIX4 513 aa17.3■□□□□ 0.36
RBM39-219ENST00000453310 FRMD3A2A2Y4 597 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 SLC16A4O15374 487 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 EFCAB14O75071 495 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 NR1I2O75469 434 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 CASP1P29466 404 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 ASIC1P78348 528 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
RBM39-219ENST00000453310 NTPCRQ9BSD7 190 aaKnown RBP17.29■□□□□ 0.36
RBM39-219ENST00000453310 BLZF1Q9H2G9 400 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 MTIF3Q9H2K0 278 aaKnown RBP17.29■□□□□ 0.36
RBM39-219ENST00000453310 ARHGAP28Q9P2N2 729 aa17.29■□□□□ 0.36
RBM39-219ENST00000453310 PHLPP2Q6ZVD8 1323 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 ZBBXA8MT70 800 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 MGEA5O60502 916 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 ERLIN2O94905 339 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 GAP43P17677 238 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 EFNA5P52803 228 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 SMTNP53814 917 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 NCKAP1LP55160 1127 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 CUL4BQ13620 913 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 PCBP1Q15365 356 aaKnown RBP eCLIP17.28■□□□□ 0.36
RBM39-219ENST00000453310 MAPK6Q16659 721 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 FAM43BQ6ZT52 329 aaPredicted RBP17.28■□□□□ 0.36
RBM39-219ENST00000453310 SFR1Q86XK3 245 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 TDHQ8IZJ6 230 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 LINC01599Q8WXQ3 324 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 CCDC34Q96HJ3 373 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 FZD8Q9H461 694 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 PRMT7Q9NVM4 692 aaPredicted RBP17.28■□□□□ 0.36
RBM39-219ENST00000453310 CXXC1Q9P0U4 656 aaPredicted RBP17.28■□□□□ 0.36
RBM39-219ENST00000453310 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
RBM39-219ENST00000453310 PIN4Q9Y237 131 aaKnown RBP17.28■□□□□ 0.36
RBM39-219ENST00000453310 GOLGA6L22H0YM25 854 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 K7ENM7 598 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 GTPBP6O43824 516 aaPredicted RBP17.27■□□□□ 0.36
RBM39-219ENST00000453310 TRAK2O60296 914 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 TSPAN1O60635 241 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 PRKCBP05771 671 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 MYL1P05976 194 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.36
RBM39-219ENST00000453310 COASYQ13057 564 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 DSC3Q14574 896 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 AMHR2Q16671 573 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 FAM187BQ17R55 369 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 RASIP1Q5U651 963 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 KANK3Q6NY19 840 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 TMEM161BQ8NDZ6 487 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 FIZ1Q96SL8 496 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 TSPYL2Q9H2G4 693 aaPredicted RBP17.27■□□□□ 0.36
RBM39-219ENST00000453310 TMEM134Q9H6X4 195 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 LMBRD1Q9NUN5 540 aa17.27■□□□□ 0.36
RBM39-219ENST00000453310 LAMA3Q16787 3333 aa17.27■□□□□ 0.35
RBM39-219ENST00000453310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
RBM39-219ENST00000453310 DENND3A2RUS2 1198 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 H0YCG3 227 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 K7ERI5 159 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 B4GALT5O43286 388 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 KINO60870 393 aaKnown RBP17.26■□□□□ 0.35
RBM39-219ENST00000453310 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 MAPTP10636 758 aaKnown RBP17.26■□□□□ 0.35
RBM39-219ENST00000453310 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
RBM39-219ENST00000453310 KCNJ6P48051 423 aa17.26■□□□□ 0.35
RBM39-219ENST00000453310 HERC4Q5GLZ8 1057 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms