RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 ZBTB41Q5SVQ8 909 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 RNF207Q6ZRF8 634 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 LARP4Q71RC2 724 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP40-209ENST00000452724 CNTD1Q8N815 330 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 OR5AN1Q8NGI8 311 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 AHCYL2Q96HN2 611 aaKnown RBP5.47□□□□□ -1.53
USP40-209ENST00000452724 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 MTG2Q9H4K7 406 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
USP40-209ENST00000452724 PRSS38A1L453 326 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 K7ESF4 209 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 MAFGO15525 162 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 KATNA1O75449 491 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 CLEC2LP0C7M8 214 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 MANFP55145 182 aaKnown RBP5.46□□□□□ -1.54
USP40-209ENST00000452724 SCAND1P57086 179 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 FOXE3Q13461 319 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
USP40-209ENST00000452724 Q8N1X5 172 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 LPPQ93052 612 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 TRIM8Q9BZR9 551 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 PITHD1Q9GZP4 211 aaPredicted RBP5.46□□□□□ -1.54
USP40-209ENST00000452724 SCAND2PQ9GZW5 306 aaPredicted RBP5.46□□□□□ -1.54
USP40-209ENST00000452724 CSRNP2Q9H175 543 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 WNT8AQ9H1J5 351 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 C14orf119Q9NWQ9 140 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 DENND2AQ9ULE3 1009 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 HS3ST3A1Q9Y663 406 aa5.46□□□□□ -1.54
USP40-209ENST00000452724 A0A0A6YYJ9 748 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 PMS2P1A4D2B8 440 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 GOLGA8AA7E2F4 631 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MATN2O00339 956 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 OPHN1O60890 802 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
USP40-209ENST00000452724 PCDH8O95206 1070 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 STAT5BP51692 787 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 ERVK-21P61565 698 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 ITKQ08881 620 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MTMR1Q13613 665 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 TBR1Q16650 682 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 DGKDQ16760 1214 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MIIPQ5JXC2 388 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 CCDC62Q6P9F0 684 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MAMDC4Q6UXC1 1216 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 BMP8AQ7Z5Y6 402 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 ADGRE4PQ86SQ3 457 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 ZFPM1Q8IX07 1006 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 OR14K1Q8NGZ2 314 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 ACAP3Q96P50 834 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MENTQ9BUN1 341 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 MRIQ9BWK5 157 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 AURKAIP1Q9NWT8 199 aaPredicted RBP5.45□□□□□ -1.54
USP40-209ENST00000452724 SAE1Q9UBE0 346 aaPredicted RBP5.45□□□□□ -1.54
USP40-209ENST00000452724 MYPNQ86TC9 1320 aa5.45□□□□□ -1.54
USP40-209ENST00000452724 CYP27B1O15528 508 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 SLC26A4O43511 780 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 PFKMP08237 780 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 ENPP1P22413 925 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 MSX2P35548 267 aaPredicted RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 ANTXR2P58335 489 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 DUSP8Q13202 625 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 FSCN1Q16658 493 aaKnown RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 CT83Q5H943 113 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 SYDE2Q5VT97 1194 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 KLHDC10Q6PID8 442 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 Q6ZSN1 163 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 BCL6BQ8N143 479 aaPredicted RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 SHCBP1Q8NEM2 672 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 LMBR1Q8WVP7 490 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 CFHR4Q92496 578 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 GFM2Q969S9 779 aaKnown RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 DYDC2Q96IM9 177 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 NOL10Q9BSC4 688 aaKnown RBP5.44□□□□□ -1.54
USP40-209ENST00000452724 HAPLN2Q9GZV7 340 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 PLA2G3Q9NZ20 509 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 MAGEL2Q9UJ55 1249 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 TRHDEQ9UKU6 1024 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 PCDHB6Q9Y5E3 794 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 NUMBLQ9Y6R0 609 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 WASHC2AQ641Q2 1341 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 WASHC2CQ9Y4E1 1318 aa5.44□□□□□ -1.54
USP40-209ENST00000452724 SUV39H1O43463 412 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 ACRV1P26436 265 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 HIBADHP31937 336 aaKnown RBP5.43□□□□□ -1.54
USP40-209ENST00000452724 PTH1RQ03431 593 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 ABHD18Q0P651 414 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 GRM7Q14831 915 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 UGT8Q16880 541 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
USP40-209ENST00000452724 PITRM1Q5JRX3 1037 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 SGMS1Q86VZ5 419 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 C1orf210Q8IVY1 113 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 ANKRD13AQ8IZ07 590 aa5.43□□□□□ -1.54
USP40-209ENST00000452724 CDYL2Q8N8U2 506 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms