RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 K7ERI5 159 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MGEA5O60502 916 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 ZNF623O75123 536 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 HIP1RO75146 1068 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 DGKIO75912 1065 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 CA3P07451 260 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MYOGP15173 224 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 RAB27AP51159 221 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PEX3P56589 373 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 BTG3Q14201 252 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MCM6Q14566 821 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MAPK6Q16659 721 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 L1TD1Q5T7N2 865 aaKnown RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 USP49Q70CQ1 688 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 ECHDC2Q86YB7 292 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 LINC01599Q8WXQ3 324 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 RSPH1Q8WYR4 309 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 LARP4BQ92615 738 aaKnown RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 SPATA32Q96LK8 384 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 SAMD11Q96NU1 681 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 NTPCRQ9BSD7 190 aaKnown RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 RUSC1Q9BVN2 902 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 FZD8Q9H461 694 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MINDY3Q9H8M7 445 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 POLD4Q9HCU8 107 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 KMT5AQ9NQR1 393 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 AGPAT5Q9NUQ2 364 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PRMT7Q9NVM4 692 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 MTMR10Q9NXD2 777 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 CHMP5Q9NZZ3 219 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 LARSQ9P2J5 1176 aaKnown RBP9.81□□□□□ -0.84
COL8A1-203ENST00000452013 ODF2LQ9ULJ1 636 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 PCDHA7Q9UN72 937 aa9.81□□□□□ -0.84
COL8A1-203ENST00000452013 LTBP2Q14767 1821 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 SFI1A8K8P3 1242 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 H0YCG3 227 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 PLS3P13797 630 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 SCP2P22307 547 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 STAT6P42226 847 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 AMPD3Q01432 767 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 TAP1Q03518 808 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 MBTD1Q05BQ5 628 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 FAM187BQ17R55 369 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 TMEM132AQ24JP5 1023 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 ARSHQ5FYA8 562 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 CDCA2Q69YH5 1023 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 NOTUMQ6P988 496 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 Q7L0L9 218 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 CMTR2Q8IYT2 770 aaKnown RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 SPIRE2Q8WWL2 714 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 ZNF689Q96CS4 500 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 FAM161BQ96MY7 647 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 TGS1Q96RS0 853 aaKnown RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 TTYH1Q9H313 450 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-203ENST00000452013 CUEDC2Q9H467 287 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 UBN1Q9NPG3 1134 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 BLOC1S4Q9NUP1 217 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 FAM105AQ9NUU6 356 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
COL8A1-203ENST00000452013 A0A1B0GUA9 196 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 LINC01553A4QN01 128 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 ACKR2O00590 384 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 TSPAN1O60635 241 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 TBCAO75347 108 aaKnown RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 FAM13AO94988 1023 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 RB1P06400 928 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 LIG1P18858 919 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 HOXA11P31270 313 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 ABCD1P33897 745 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 NPTX2P47972 431 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 ERVK-21P61565 698 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 RAD51AP2Q09MP3 1159 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 PRPF4BQ13523 1007 aaKnown RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 GIT2Q14161 759 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 GRIN2CQ14957 1233 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 AXDND1Q5T1B0 1012 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 ADALQ6DHV7 355 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 SHC4Q6S5L8 630 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 PPP4R3CPQ6ZMV5 832 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 DAW1Q8N136 415 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 MYCT1Q8N699 235 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 PDILTQ8N807 584 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 RNF169Q8NCN4 708 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 SLC17A8Q8NDX2 589 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms