RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CIZ1Q9ULV3 898 aaPredicted RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 COL4A4P53420 1690 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 HIP1RO75146 1068 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 ZSCAN20P17040 1043 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 AXLP30530 894 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 HOXA11P31270 313 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 FOXD4L6Q3SYB3 417 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 SHC4Q6S5L8 630 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 FOXD4L3Q6VB84 417 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 MAEAQ7L5Y9 396 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 CATSPER4Q7RTX7 472 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 LEO1Q8WVC0 666 aaPredicted RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 NTPCRQ9BSD7 190 aaKnown RBP15.89■□□□□ 0.13
COL3A1-203ENST00000450867 ZBED2Q9BTP6 218 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 C2orf40Q9H1Z8 148 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 NKX2-4Q9H2Z4 354 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 FZD8Q9H461 694 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 TMEM161AQ9NX61 479 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 PCDHA7Q9UN72 937 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 ADGRA3Q8IWK6 1321 aa15.89■□□□□ 0.13
COL3A1-203ENST00000450867 A0A087X0B3 334 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 A0A0U1RQF3 1178 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 LRRIQ4A6NIV6 560 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 TSPAN1O60635 241 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 DGKIO75912 1065 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 CA3P07451 260 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 MYOGP15173 224 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 ZNF131P52739 623 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 MCM6Q14566 821 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 E2F4Q16254 413 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 RESP18Q5W5W9 173 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
COL3A1-203ENST00000450867 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 CCDC51Q96ER9 411 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 IFT74Q96LB3 600 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 SCAND2PQ9GZW5 306 aaPredicted RBP15.88■□□□□ 0.13
COL3A1-203ENST00000450867 SEMA6BQ9H3T3 888 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 SLC28A3Q9HAS3 691 aa15.88■□□□□ 0.13
COL3A1-203ENST00000450867 PRMT7Q9NVM4 692 aaPredicted RBP15.88■□□□□ 0.13
COL3A1-203ENST00000450867 PIN4Q9Y237 131 aaKnown RBP15.88■□□□□ 0.13
COL3A1-203ENST00000450867 LCHNA4D1U4 455 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ZNF623O75123 536 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ARHGEF15O94989 841 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 EOMESO95936 686 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 SSBP05455 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
COL3A1-203ENST00000450867 NPTX2P47972 431 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ME1P48163 572 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 RAB27AP51159 221 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 EFNA5P52803 228 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 TAP1Q03518 808 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 GPBP1Q86WP2 473 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ECHDC2Q86YB7 292 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ZBTB8OSQ8IWT0 167 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 RASSF8Q8NHQ8 419 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 SPATA32Q96LK8 384 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ZNF576Q9H609 170 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 MTMR10Q9NXD2 777 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 KCNG1Q9UIX4 513 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 PHLPP2Q6ZVD8 1323 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 CNTNAP2Q9UHC6 1331 aa15.87■□□□□ 0.13
COL3A1-203ENST00000450867 LINC01553A4QN01 128 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 INO80B-WBP1J3KQ70 363 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 ERLIN2O94905 339 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 UPP2O95045 317 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 SKIP12755 728 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 PLS3P13797 630 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 DMP1Q13316 513 aaPredicted RBP15.86■□□□□ 0.13
COL3A1-203ENST00000450867 UBXN11Q5T124 520 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 PPP2R2DQ66LE6 453 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 CMTR2Q8IYT2 770 aaKnown RBP15.86■□□□□ 0.13
COL3A1-203ENST00000450867 DEFB123Q8N688 67 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 CHAMP1Q96JM3 812 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 RNF19AQ9NV58 838 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
COL3A1-203ENST00000450867 TDRD15B5MCY1 1934 aaKnown RBP15.86■□□□□ 0.13
COL3A1-203ENST00000450867 ATG2AQ2TAZ0 1938 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 TRIP11Q15643 1979 aa15.86■□□□□ 0.13
COL3A1-203ENST00000450867 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 A0A1B0GUA9 196 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 ACKR2O00590 384 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 LINC00271P0C7V0 271 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 ARF4P18085 180 aaPredicted RBP15.85■□□□□ 0.13
COL3A1-203ENST00000450867 SCP2P22307 547 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 STAT6P42226 847 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 ERVK-21P61565 698 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms