RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 EPHB6O15197 1021 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.09
USP39-207ENST00000450066 ADSSP30520 456 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 CYP4F22Q6NT55 531 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.09
USP39-207ENST00000450066 INTS8Q75QN2 995 aaKnown RBP15.58■□□□□ 0.09
USP39-207ENST00000450066 TAS1R3Q7RTX0 852 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 DEPTORQ8TB45 409 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 APBA2Q99767 749 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 RNPEPQ9H4A4 650 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 PCIF1Q9H4Z3 704 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 FLRT1Q9NZU1 646 aa15.58■□□□□ 0.09
USP39-207ENST00000450066 DOCK3Q8IZD9 2030 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 GTPBP10A4D1E9 387 aaKnown RBP15.58■□□□□ 0.08
USP39-207ENST00000450066 SOWAHDA6NJG2 315 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 ANKRD63C9JTQ0 380 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 TNFAIP2Q03169 654 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 NOGQ13253 232 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 GRM1Q13255 1194 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 MXD4Q14582 209 aaPredicted RBP15.58■□□□□ 0.08
USP39-207ENST00000450066 MEA1Q16626 185 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 ZNF484Q5JVG2 852 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 PRPF31Q8WWY3 499 aaKnown RBP15.58■□□□□ 0.08
USP39-207ENST00000450066 C16orf70Q9BSU1 422 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 CRACR2AQ9BSW2 395 aa15.58■□□□□ 0.08
USP39-207ENST00000450066 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.08
USP39-207ENST00000450066 LRRIQ4A6NIV6 560 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 HNRNPDLO14979 420 aaKnown RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 ZSCAN12O43309 604 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 IGHA2P01877 340 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 HNRNPH3P31942 346 aaKnown RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 MCCD1P59942 119 aaPredicted RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 BFSP1Q12934 665 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 STRN3Q13033 797 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 CAPSQ13938 189 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 OR6J1Q8NGC5 347 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 ZNHIT6Q9NWK9 470 aaKnown RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 CEP72Q9P209 647 aa15.57■□□□□ 0.08
USP39-207ENST00000450066 ZNF215Q9UL58 517 aaPredicted RBP15.57■□□□□ 0.08
USP39-207ENST00000450066 K7ERI5 159 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 ADCY6O43306 1168 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 ADCY3O60266 1144 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 NOL4O94818 638 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 MMP3P08254 477 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 ZNF865P0CJ78 1059 aaPredicted RBP15.56■□□□□ 0.08
USP39-207ENST00000450066 KRT13P13646 458 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 CYP2B6P20813 491 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 GARTP22102 1010 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
USP39-207ENST00000450066 DRP2Q13474 957 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 DGKDQ16760 1214 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 EXOC3L4Q17RC7 722 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 SLC39A4Q6P5W5 647 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 WDR59Q6PJI9 974 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 RAD9BQ6WBX8 426 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 TOGARAM2Q6ZUX3 1019 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 RDH13Q8NBN7 331 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 PSPC1Q8WXF1 523 aaKnown RBP15.56■□□□□ 0.08
USP39-207ENST00000450066 PPP1R13BQ96KQ4 1090 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 LSM14BQ9BX40 385 aaKnown RBP15.56■□□□□ 0.08
USP39-207ENST00000450066 TMEM134Q9H6X4 195 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 SUGCTQ9HAC7 445 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 PLCB1Q9NQ66 1216 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 GNEQ9Y223 722 aaKnown RBP15.56■□□□□ 0.08
USP39-207ENST00000450066 PPP2R2CQ9Y2T4 447 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 PIGRP01833 764 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 EFNA5P52803 228 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 CDK17Q00537 523 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 MTF1Q14872 753 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 CCL14Q16627 93 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 GBP6Q6ZN66 633 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 BAP1Q92560 729 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 BICD1Q96G01 975 aa15.56■□□□□ 0.08
USP39-207ENST00000450066 H3BRB1 525 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 ZNF286BP0CG31 522 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 INSRRP14616 1297 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 CTGFP29279 349 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 CYP2C19P33261 490 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 FMO5P49326 533 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 SNRNP35Q16560 246 aaKnown RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 DNTTIP2Q5QJE6 756 aaKnown RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 NYAP1Q6ZVC0 841 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 CACNA2D4Q7Z3S7 1137 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 TRAPPC12Q8WVT3 735 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 POMGNT1Q8WZA1 660 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 FBXL18Q96ME1 805 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 NUCKS1Q9H1E3 243 aaKnown RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 TUT1Q9H6E5 874 aaKnown RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 STYXL1Q9Y6J8 313 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 PHLPP2Q6ZVD8 1323 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 COL1A2P08123 1366 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 A6NJR5 290 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 C22orf31O95567 290 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 PON1P27169 355 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 LIG4P49917 911 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms