RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 RPS9P46781 194 aaKnown RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 HSD17B4P51659 736 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 POLGP54098 1239 aaPredicted RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 CTDSPL2Q05D32 466 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 UBXN2BQ14CS0 331 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 PGM5Q15124 567 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 CDC37Q16543 378 aaPredicted RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 SLC39A11Q8N1S5 342 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 CMASQ8NFW8 434 aaPredicted RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 ZCCHC14Q8WYQ9 949 aaKnown RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 MAP4K1Q92918 833 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 FOXJ1Q92949 421 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 ZNF775Q96BV0 537 aaPredicted RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM169Q96HH4 297 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 KLHL5Q96PQ7 755 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 NAPBQ9H115 298 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 ZBP1Q9H171 429 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 WDR6Q9NNW5 1121 aaKnown RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 STAM2O75886 525 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 KCNK5O95279 499 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 CFBP00751 764 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ZFYP08048 801 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 FGFR1P11362 822 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 PBX3P40426 434 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 MLF2Q15773 248 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 AASDHQ4L235 1098 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 SOWAHCQ53LP3 525 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 UTP14CQ5TAP6 766 aaKnown RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 CEP85Q6P2H3 762 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ELMSAN1Q6PJG2 1045 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 PRR23BQ6ZRT6 265 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 STOX1Q6ZVD7 989 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 CYFIP1Q7L576 1253 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 TRMT2AQ8IZ69 625 aaKnown RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ABI1Q8IZP0 508 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM57Q8N5G2 664 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 FAM174AQ8TBP5 190 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ADAM2Q99965 735 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM47Q9BQJ4 181 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 CELF4Q9BZC1 486 aaKnown RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 FAM49AQ9H0Q0 323 aaPredicted RBP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 LTB4R2Q9NPC1 389 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 RXFP3Q9NSD7 469 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 ERAP1Q9NZ08 941 aa9.11□□□□□ -0.95
LINC01961-201ENST00000449954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
LINC01961-201ENST00000449954 RRN3P2A6NIE6 340 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 FAM170BA6NMN3 283 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 ANHXE9PGG2 379 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 FIBPO43427 364 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 MGEA5O60502 916 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 RANBP6O60518 1105 aaKnown RBP9.1□□□□□ -0.95
LINC01961-201ENST00000449954 CTSAP10619 480 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
LINC01961-201ENST00000449954 HTR4Q13639 388 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 LPAL2Q16609 132 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 MARCH8Q5T0T0 291 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 TSSK4Q6SA08 328 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 FAM9BQ8IZU0 186 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 VPS52Q8N1B4 723 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 GATA6Q92908 595 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.95
LINC01961-201ENST00000449954 TNPO1Q92973 898 aaKnown RBP9.1□□□□□ -0.95
LINC01961-201ENST00000449954 CLDN23Q96B33 292 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 CASD1Q96PB1 797 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 INPP4AQ96PE3 977 aaPredicted RBP9.1□□□□□ -0.95
LINC01961-201ENST00000449954 NELL2Q99435 816 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 IER2Q9BTL4 223 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 STK39Q9UEW8 545 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 DPP7Q9UHL4 492 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 COL4A3Q01955 1670 aa9.1□□□□□ -0.95
LINC01961-201ENST00000449954 DOCK8Q8NF50 2099 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 GPR182O15218 404 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 ORC4O43929 436 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 RPS6KA5O75582 802 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 LAMP2P13473 410 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 CLCN4P51793 760 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 KRT76Q01546 638 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 PFKPQ01813 784 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM266Q2M3C6 531 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 NME8Q8N427 588 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 GIMAP8Q8ND71 665 aaPredicted RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 IL31RAQ8NI17 732 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 FEZF2Q8TBJ5 459 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 RSPH1Q8WYR4 309 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 MYADMQ96S97 322 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 SENP7Q9BQF6 1050 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 LSM14BQ9BX40 385 aaKnown RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 EMILIN2Q9BXX0 1053 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms