RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PTGISQ16647 500 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 SYCP3Q8IZU3 236 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 ZNF668Q96K58 619 aaPredicted RBP21.48■■□□□ 1.03
SGCE-207ENST00000447873 ACCSQ96QU6 501 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 MED15Q96RN5 788 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 TSG101Q99816 390 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 TMEM206Q9H813 350 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 NOD1Q9Y239 953 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 GOLGA6L19H0YKK7 550 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 K7ERI5 159 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 EFNA5P52803 228 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 PMS1P54277 932 aaKnown RBP21.47■■□□□ 1.03
SGCE-207ENST00000447873 NLRP11P59045 1033 aaKnown RBP21.47■■□□□ 1.03
SGCE-207ENST00000447873 POU5F1BQ06416 359 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 TPD52L1Q16890 204 aaPredicted RBP21.47■■□□□ 1.03
SGCE-207ENST00000447873 CDCA2Q69YH5 1023 aaPredicted RBP21.47■■□□□ 1.03
SGCE-207ENST00000447873 ANKRD40Q6AI12 368 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 NME8Q8N427 588 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 NLRP7Q8WX94 980 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 SCLT1Q96NL6 688 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 PPP1R16BQ96T49 567 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 TMEM106CQ9BVX2 250 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 SEZ6LQ9BYH1 1024 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 C2orf40Q9H1Z8 148 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 KCTD10Q9H3F6 313 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 EXOC7Q9UPT5 735 aa21.47■■□□□ 1.03
SGCE-207ENST00000447873 A0A087WZ62 844 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 ARVCFO00192 962 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 PHKA2P46019 1235 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 GPC3P51654 580 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 PTENP60484 403 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 LRRC63Q05C16 580 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 TMEM62Q0P6H9 643 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 STRN3Q13033 797 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 SPATA1Q5VX52 437 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 SERINC5Q86VE9 423 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 SLC43A3Q8NBI5 491 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 FDXACB1Q9BRP7 624 aaPredicted RBP21.46■■□□□ 1.03
SGCE-207ENST00000447873 TMEM134Q9H6X4 195 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 NFE2L3Q9Y4A8 694 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 SIP14410 1827 aa21.46■■□□□ 1.03
SGCE-207ENST00000447873 PHLPP2Q6ZVD8 1323 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 PDXKO00764 312 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 RPLP2P05387 115 aaKnown RBP21.45■■□□□ 1.02
SGCE-207ENST00000447873 NCAPHQ15003 741 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 TTI2Q6NXR4 508 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 RSPH3Q86UC2 560 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 ZNF410Q86VK4 478 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 MAP4K3Q8IVH8 894 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 KCNN1Q92952 543 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 NFKBIZQ9BYH8 718 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 SENP6Q9GZR1 1112 aaPredicted RBP21.45■■□□□ 1.02
SGCE-207ENST00000447873 GBP3Q9H0R5 595 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 TRMT13Q9NUP7 481 aaKnown RBP21.45■■□□□ 1.02
SGCE-207ENST00000447873 TYW1Q9NV66 732 aaKnown RBP21.45■■□□□ 1.02
SGCE-207ENST00000447873 GINS2Q9Y248 185 aa21.45■■□□□ 1.02
SGCE-207ENST00000447873 CALUO43852 315 aaPredicted RBP21.44■■□□□ 1.02
SGCE-207ENST00000447873 TPM4P67936 248 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 KIZQ2M2Z5 673 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 HS2ST1Q7LGA3 356 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 ANKLE1Q8NAG6 615 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 IFT122Q9HBG6 1241 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 KIAA0100Q14667 2235 aaKnown RBP21.44■■□□□ 1.02
SGCE-207ENST00000447873 ZMYM2Q9UBW7 1377 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 FSD2A1L4K1 749 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 INO80B-WBP1J3KQ70 363 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 MAPK6Q16659 721 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 ZCWPW2Q504Y3 356 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 FOXR2Q6PJQ5 311 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 TAS1R3Q7RTX0 852 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 CSGALNACT2Q8N6G5 542 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 GOLGA5Q8TBA6 731 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 BICD1Q96G01 975 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 CTAGE1Q96RT6 745 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 INO80BQ9C086 356 aaPredicted RBP21.44■■□□□ 1.02
SGCE-207ENST00000447873 TRAF3IP3Q9Y228 551 aa21.44■■□□□ 1.02
SGCE-207ENST00000447873 TGFB1I1O43294 461 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 GPR32O75388 356 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 MNX1P50219 401 aaPredicted RBP21.43■■□□□ 1.02
SGCE-207ENST00000447873 PTK7Q13308 1070 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 EDRF1Q3B7T1 1238 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 IFNLR1Q8IU57 520 aaPredicted RBP21.43■■□□□ 1.02
SGCE-207ENST00000447873 DUSP9Q99956 384 aaKnown RBP21.43■■□□□ 1.02
SGCE-207ENST00000447873 GCOM2Q9BZD3 368 aaPredicted RBP21.43■■□□□ 1.02
SGCE-207ENST00000447873 CCDC113Q9H0I3 377 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 TRPV6Q9H1D0 765 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 IKZF4Q9H2S9 585 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 ADAMTS10Q9H324 1103 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 FANCLQ9NW38 375 aa21.43■■□□□ 1.02
SGCE-207ENST00000447873 M0QZ92 97 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 HNRNPDLO14979 420 aaKnown RBP21.42■■□□□ 1.02
SGCE-207ENST00000447873 B4GALT4O60513 344 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 CAPN2P17655 700 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 CDK7P50613 346 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 MBTD1Q05BQ5 628 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 SRGAP1Q7Z6B7 1085 aa21.42■■□□□ 1.02
SGCE-207ENST00000447873 PRKCBP05771 671 aa21.41■■□□□ 1.02
SGCE-207ENST00000447873 FKBP3Q00688 224 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms