RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ZNF410Q86VK4 478 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 SMYD4Q8IYR2 804 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 C7orf61Q8IZ16 206 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 KIAA0895Q8NCT3 520 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 TMEM161BQ8NDZ6 487 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 TMEM40Q8WWA1 233 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 NTPCRQ9BSD7 190 aaKnown RBP19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 OLFML3Q9NRN5 406 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 ARHGAP28Q9P2N2 729 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 TRIM43BA6NCK2 446 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 CAND2O75155 1236 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 GCNT3O95395 438 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 RPLP2P05387 115 aaKnown RBP19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 CRYBB1P53674 252 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 PSMD2Q13200 908 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 MORC3Q14149 939 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 LRRC8DQ7L1W4 858 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 TAS1R3Q7RTX0 852 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 ZNF720Q7Z2F6 126 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 ZBTB8OSQ8IWT0 167 aa19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 TRIM43Q96BQ3 446 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 GCOM2Q9BZD3 368 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC4-203ENST00000447216 DENND3A2RUS2 1198 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 INO80B-WBP1J3KQ70 363 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 PRPF6O94906 941 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 MAPTP10636 758 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 DARSP14868 501 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 SELPP16109 830 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 BMP6P22004 513 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 CCL23P55773 120 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 CDC42EP1Q00587 391 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 MBTD1Q05BQ5 628 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 IFNLR1Q8IU57 520 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 SCLYQ96I15 445 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 HTATIP2Q9BUP3 242 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 INO80BQ9C086 356 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 C2orf40Q9H1Z8 148 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 MAPK8IP1Q9UQF2 711 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 USP20Q9Y2K6 914 aa19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 NOC2LQ9Y3T9 749 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-203ENST00000447216 SYCE3A1L190 88 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 PITPNM1O00562 1244 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 PPP1R37O75864 691 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 EDN1P05305 212 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 IQCF3P0C7M6 154 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 GHRP10912 638 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 POU5F1BQ06416 359 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 MBTPS1Q14703 1052 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 ZSCAN23Q3MJ62 389 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 ZNF658Q5TYW1 1059 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 EPM2AIP1Q7L775 607 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 SRGAP1Q7Z6B7 1085 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 STRA6Q9BX79 667 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 CCDC113Q9H0I3 377 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 IKZF4Q9H2S9 585 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 LTBP2Q14767 1821 aa19.8■□□□□ 0.76
TRAPPC4-203ENST00000447216 PHLPP2Q6ZVD8 1323 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 K7ERI5 159 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 KIAA0355O15063 1070 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 PRKCBP05771 671 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 EIF4BP23588 611 aaKnown RBP19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 ITGB8P26012 769 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 EFNA5P52803 228 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 GTF2BQ00403 316 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 KCNA1Q09470 495 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 LPIN1Q14693 890 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 FBXO47Q5MNV8 452 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 NELFCDQ8IXH7 590 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 ZNF710Q8N1W2 664 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 NFKBIZQ9BYH8 718 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 ST6GALNAC4Q9H4F1 302 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 TMEM134Q9H6X4 195 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 KCNG1Q9UIX4 513 aa19.79■□□□□ 0.76
TRAPPC4-203ENST00000447216 TTLL13PA6NNM8 815 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 H0YCG3 227 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 CD44P16070 742 aaKnown RBP19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 HOXD13P35453 343 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 PRCPP42785 496 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 NLRP12P59046 1061 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 SASS6Q6UVJ0 657 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 CATSPER4Q7RTX7 472 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 FAM228AQ86W67 206 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 TRIML1Q8N9V2 468 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 SLC17A8Q8NDX2 589 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 SCFD1Q8WVM8 642 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 DPF3Q92784 378 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 AGO3Q9H9G7 860 aaKnown RBP19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 TBX20Q9UMR3 447 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 PCDHB13Q9Y5F0 798 aa19.78■□□□□ 0.76
TRAPPC4-203ENST00000447216 EIF3DO15371 548 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 B4GALT5O43286 388 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 EVI5O60447 810 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 NBNO60934 754 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 RPS6KA5O75582 802 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 TIMP1P01033 207 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 RAG1P15918 1043 aa19.77■□□□□ 0.76
TRAPPC4-203ENST00000447216 CD52P31358 61 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms