RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PHF2O75151 1096 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 PSMD10O75832 226 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 NDUFB10O96000 172 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CHRNA3P32297 505 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 PTGIRP43119 386 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 MMP13P45452 471 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 SPRED3Q2MJR0 410 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 LMO3Q8TAP4 145 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CCT6BQ92526 530 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 MYCBPQ99417 103 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-204ENST00000447182 PCYOX1Q9UHG3 505 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 PNMA2Q9UL42 364 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 ALG6Q9Y672 507 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 DDTLA6NHG4 134 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-204ENST00000447182 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 PHF20L1A8MW92 1017 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 SHBGP04278 402 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 HOXA13P31271 388 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-204ENST00000447182 BFSP1Q12934 665 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 MYBPC2Q14324 1141 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 DENND2CQ68D51 928 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 PHLDB3Q6NSJ2 640 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 PALB2Q86YC2 1186 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 FAM178BQ8IXR5 827 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 VTI1AQ96AJ9 217 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 DYDC2Q96IM9 177 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 C8orf37Q96NL8 207 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 ZNF317Q96PQ6 595 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-204ENST00000447182 AGPAT1Q99943 283 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 MRIQ9BWK5 157 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 PODXLO00592 558 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 TRIM49P0CI25 452 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 TRIM49CP0CI26 452 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 COPB2P35606 906 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 CYP2J2P51589 502 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 PLTPP55058 493 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 ZNF211Q13398 564 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-204ENST00000447182 MDM1Q8TC05 714 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 FBXO25Q8TCJ0 367 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 RNF25Q96BH1 459 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-204ENST00000447182 WDR18Q9BV38 432 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 TMEM109Q9BVC6 243 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 GRHL1Q9NZI5 618 aa20.62■□□□□ 0.89
SDCBP-204ENST00000447182 RBBP6Q7Z6E9 1792 aaKnown RBP20.61■□□□□ 0.89
SDCBP-204ENST00000447182 FOXN3O00409 490 aaPredicted RBP20.61■□□□□ 0.89
SDCBP-204ENST00000447182 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
SDCBP-204ENST00000447182 GGPS1O95749 300 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 BCRP11274 1271 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 CTNNA2P26232 953 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 SCTRP47872 440 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 PPARDQ03181 441 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 ADAT2Q7Z6V5 191 aaKnown RBP20.61■□□□□ 0.89
SDCBP-204ENST00000447182 RPAINQ86UA6 219 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 FUKQ8N0W3 1084 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 UBL4BQ8N7F7 174 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 SLC5A5Q92911 643 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 TACO1Q9BSH4 297 aaKnown RBP20.61■□□□□ 0.89
SDCBP-204ENST00000447182 STRA6Q9BX79 667 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 PARP2Q9UGN5 583 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 SNX24Q9Y343 169 aa20.61■□□□□ 0.89
SDCBP-204ENST00000447182 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 BACH1O14867 736 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 CTNND1O60716 968 aaKnown RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 BMP3P12645 472 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 XRCC4Q13426 336 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ARHGAP44Q17R89 818 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 DOK7Q18PE1 504 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 SH3BP5LQ7L8J4 393 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 CCDC50Q8IVM0 306 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ATXN2LQ8WWM7 1075 aaKnown RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ZKSCAN4Q969J2 545 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 NACC1Q96RE7 527 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 RPS6KC1Q96S38 1066 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ADAM7Q9H2U9 754 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 GOPCQ9HD26 462 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 RPTORQ8N122 1335 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ASAP2O43150 1006 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 CHN1P15882 459 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 PRELPP51888 382 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 TCP10Q12799 353 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 C6orf118Q5T5N4 469 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 CYB5D1Q6P9G0 228 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 COL23A1Q86Y22 540 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 PRELID2Q8N945 189 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 SGSM3Q96HU1 749 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 CCDC134Q9H6E4 229 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 SEPT11Q9NVA2 429 aaKnown RBP20.6■□□□□ 0.89
SDCBP-204ENST00000447182 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 PCDHA3Q9Y5H8 950 aa20.6■□□□□ 0.89
SDCBP-204ENST00000447182 ZBTB39O15060 712 aa20.59■□□□□ 0.89
SDCBP-204ENST00000447182 DNAJC8O75937 253 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-204ENST00000447182 AGTP01019 485 aa20.59■□□□□ 0.89
SDCBP-204ENST00000447182 ADCY2Q08462 1091 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms