RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PCDHGA4Q9Y5G9 962 aa14.21□□□□□ -0.13
DDX56-206ENST00000446987 ZNF233A6NK53 670 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 ABL1P00519 1130 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 CYBAP13498 195 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 ATP4AP20648 1035 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 SEC24CP53992 1094 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 DYNC1I2Q13409 638 aaKnown RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 GKAP1Q5VSY0 366 aaPredicted RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 CACNA2D4Q7Z3S7 1137 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 UNC93B1Q9H1C4 597 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 LIMA1Q9UHB6 759 aaKnown RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 BAIAP2L1Q9UHR4 511 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 GUCA1BQ9UMX6 200 aa14.21□□□□□ -0.14
DDX56-206ENST00000446987 MRPL11Q9Y3B7 192 aaKnown RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 V9GY48 417 aaPredicted RBP14.21□□□□□ -0.14
DDX56-206ENST00000446987 ADAMTS3O15072 1205 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 ZMYND10O75800 440 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 SNAI1O95863 264 aaPredicted RBP14.2□□□□□ -0.14
DDX56-206ENST00000446987 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX56-206ENST00000446987 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
DDX56-206ENST00000446987 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 PAK2Q13177 524 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 RNF207Q6ZRF8 634 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 SYTL5Q8TDW5 730 aaPredicted RBP14.2□□□□□ -0.14
DDX56-206ENST00000446987 WHAMMQ8TF30 809 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 PLEKHG4BQ96PX9 1271 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 MED15Q96RN5 788 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 TSGA10Q9BZW7 698 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 SLC12A6Q9UHW9 1150 aa14.2□□□□□ -0.14
DDX56-206ENST00000446987 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 PDE2AO00408 941 aaPredicted RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 MYCP01106 439 aaPredicted RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 CCND3P30281 292 aaPredicted RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 FOSBP53539 338 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 HHATQ5VTY9 493 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 CREG2Q8IUH2 290 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 TRMT44Q8IYL2 757 aaKnown RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 CCDC63Q8NA47 563 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 MORC4Q8TE76 937 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 EPAS1Q99814 870 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 GORASP1Q9BQQ3 440 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 TINF2Q9BSI4 451 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 RNF26Q9BY78 433 aaPredicted RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 YIPF3Q9GZM5 350 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 TMBIM4Q9HC24 238 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 KCNMB3Q9NPA1 279 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 PAK6Q9NQU5 681 aaPredicted RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 GDF3Q9NR23 364 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 HDAC6Q9UBN7 1215 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 RNF14Q9UBS8 474 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 CTNNAL1Q9UBT7 734 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 SEC63Q9UGP8 760 aaKnown RBP14.19□□□□□ -0.14
DDX56-206ENST00000446987 SNX12Q9UMY4 172 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
DDX56-206ENST00000446987 CCT8L1PA6NM43 557 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 MEIS2O14770 477 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 ZSCAN9O15535 394 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 RNF8O76064 485 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 CCL5P13501 91 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 TCP1P17987 556 aaKnown RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 IBSPP21815 317 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 EDNRBP24530 442 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 CALML3P27482 149 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 CD151P48509 253 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 MRPS35P82673 323 aaKnown RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 CUL3Q13618 768 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 BYSLQ13895 437 aaKnown RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 ITIH4Q14624 930 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 PFKFB3Q16875 520 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 HIBCHQ6NVY1 386 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 MAATS1Q7Z4T9 603 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 CENPTQ96BT3 561 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 FRMPD4Q14CM0 1322 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 ADCY6O43306 1168 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 WFS1O76024 890 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 CFBP00751 764 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 FAM163BP0C2L3 166 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 HOXA13P31271 388 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 C2orf54Q08AI8 447 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 PRAMEF19Q5SWL8 479 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 AGBL2Q5U5Z8 902 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 ARMCX2Q7L311 632 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 HEATR3Q7Z4Q2 680 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 APBB1IPQ7Z5R6 666 aaPredicted RBP14.18□□□□□ -0.14
DDX56-206ENST00000446987 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
DDX56-206ENST00000446987 RBM41Q96IZ5 413 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms