RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.14■□□□□ 0.81
PHTF1-207ENST00000446739 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 REEP2Q9BRK0 252 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 LRRC27Q9C0I9 530 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 TNMDQ9H2S6 317 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 CHST12Q9NRB3 414 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 C1orf112Q9NSG2 853 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 LARSQ9P2J5 1176 aaKnown RBP20.14■□□□□ 0.81
PHTF1-207ENST00000446739 HPSEQ9Y251 543 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 DENND3A2RUS2 1198 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 ERLIN2O94905 339 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 FAM13AO94988 1023 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 PLS3P13797 630 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 EFNA5P52803 228 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 DEFB103AP81534 67 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 DSC3Q14574 896 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 RTN4RL1Q86UN2 441 aaPredicted RBP20.13■□□□□ 0.81
PHTF1-207ENST00000446739 MYOCDQ8IZQ8 938 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 SPIRE2Q8WWL2 714 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 MRPS27Q92552 414 aaKnown RBP20.13■□□□□ 0.81
PHTF1-207ENST00000446739 ADAM2Q99965 735 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 RGS18Q9NS28 235 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 AGPAT5Q9NUQ2 364 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 KBTBD4Q9NVX7 518 aa20.13■□□□□ 0.81
PHTF1-207ENST00000446739 PHLPP2Q6ZVD8 1323 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 MYMKA6NI61 221 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 MGEA5O60502 916 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 TBCAO75347 108 aaKnown RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 AXLP30530 894 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 NPTX2P47972 431 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 ZNF131P52739 623 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 SMTNP53814 917 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 AMPD3Q01432 767 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 FSIP1Q8NA03 581 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 DDX12PQ92771 950 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 NTPCRQ9BSD7 190 aaKnown RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 KMT5AQ9NQR1 393 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 PRMT7Q9NVM4 692 aaPredicted RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 DACT1Q9NYF0 836 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 USP25Q9UHP3 1055 aa20.12■□□□□ 0.81
PHTF1-207ENST00000446739 PIN4Q9Y237 131 aaKnown RBP20.12■□□□□ 0.81
PHTF1-207ENST00000446739 ADGRA3Q8IWK6 1321 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 CCDC169A6NNP5 214 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 SFI1A8K8P3 1242 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 SYKP43405 635 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 MAPK6Q16659 721 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 AMHR2Q16671 573 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 FAM187BQ17R55 369 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 FAM109BQ6ICB4 259 aaPredicted RBP20.11■□□□□ 0.81
PHTF1-207ENST00000446739 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 SLC24A5Q71RS6 500 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 HERC6Q8IVU3 1022 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 CEP57L1Q8IYX8 460 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 TOP1MTQ969P6 601 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 PRIMPOLQ96LW4 560 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 FZD8Q9H461 694 aa20.11■□□□□ 0.81
PHTF1-207ENST00000446739 C9IYK1 514 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 H0YCG3 227 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 TSPAN1O60635 241 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 SLFN14P0C7P3 912 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 SARSP49591 514 aaKnown RBP20.1■□□□□ 0.81
PHTF1-207ENST00000446739 NDUFA8P51970 172 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 DNAJC19Q96DA6 116 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 KIFC3Q9BVG8 833 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 TRAIPQ9BWF2 469 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 CCDC113Q9H0I3 377 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 TMEM134Q9H6X4 195 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 ARHGAP28Q9P2N2 729 aa20.1■□□□□ 0.81
PHTF1-207ENST00000446739 FNDC1Q4ZHG4 1894 aaPredicted RBP20.09■□□□□ 0.81
PHTF1-207ENST00000446739 GRXCR1A8MXD5 290 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 K7ERI5 159 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 GJB5O95377 273 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 PRKCBP05771 671 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 STAG3L1P0CL83 205 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 SCP2P22307 547 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 TPRNQ4KMQ1 711 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
PHTF1-207ENST00000446739 NPAS4Q8IUM7 802 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 MYCT1Q8N699 235 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 TMEM87AQ8NBN3 555 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 CCDC51Q96ER9 411 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 ZBED2Q9BTP6 218 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 TRIM9Q9C026 710 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 ZHX3Q9H4I2 956 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 SEL1LQ9UBV2 794 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 SERTAD1Q9UHV2 236 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 PCDHA11Q9Y5I1 949 aa20.09■□□□□ 0.81
PHTF1-207ENST00000446739 ACKR2O00590 384 aa20.08■□□□□ 0.81
PHTF1-207ENST00000446739 SLC16A4O15374 487 aa20.08■□□□□ 0.81
PHTF1-207ENST00000446739 ACTN4O43707 911 aaKnown RBP20.08■□□□□ 0.81
PHTF1-207ENST00000446739 SKIP12755 728 aa20.08■□□□□ 0.81
PHTF1-207ENST00000446739 GAP43P17677 238 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms