RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TRIM37O94972 964 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 SCP2P22307 547 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 JAG1P78504 1218 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 CERKLQ49MI3 558 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 SYCP3Q8IZU3 236 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 PRELID2Q8N945 189 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 FAM212AQ96EL1 285 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 FAM84AQ96KN4 292 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 PWWP2AQ96N64 755 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 RAB17Q9H0T7 212 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 SLITRK3O94933 977 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 ACSL3O95573 720 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 HLA-DOAP06340 250 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 GCLMP48507 274 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 LONRF1Q17RB8 773 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 ACCSLQ4AC99 568 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 ODR4Q5SWX8 454 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 CCDC197Q8NCU1 140 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 TBC1D22AQ8WUA7 517 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 TLCD1Q96CP7 247 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 DDX23Q9BUQ8 820 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 PABPC3Q9H361 631 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 LRRC4BQ9NT99 713 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 INTS9Q9NV88 658 aaKnown RBP15.36■□□□□ 0.05
ERCC3-203ENST00000445889 VAV3Q9UKW4 847 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 RPTORQ8N122 1335 aa15.36■□□□□ 0.05
ERCC3-203ENST00000445889 CYP3A7-CYP3A51PA0A087WV96 503 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 GOLGA6L10A0A0M3HER8 536 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 C5orf60A6NFR6 353 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 SRRM3A6NNA2 597 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-203ENST00000445889 G3V3G9 751 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 TMEM253P0C7T8 217 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 PYGMP11217 842 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 LMNB1P20700 586 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 CYP3A7P24462 503 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 SEPT14Q6ZU15 432 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 ARHGEF19Q8IW93 802 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 FAM178BQ8IXR5 827 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 FAM118BQ9BPY3 351 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 AMNQ9BXJ7 453 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 TXLNGYQ9BZA5 131 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 FAM129AQ9BZQ8 928 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 ABCF3Q9NUQ8 709 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 MCM8Q9UJA3 840 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 SUFUQ9UMX1 484 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 COMTP21964 271 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 ELF1P32519 619 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 VPS41P49754 854 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 MAPK7Q13164 816 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 CCDC137Q6PK04 289 aaKnown RBP15.35■□□□□ 0.05
ERCC3-203ENST00000445889 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 CCDC105Q8IYK2 499 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 SEC14L1Q92503 715 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 ZNF317Q96PQ6 595 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-203ENST00000445889 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 ZC3H12CQ9C0D7 883 aaKnown RBP15.35■□□□□ 0.05
ERCC3-203ENST00000445889 GRHL1Q9NZI5 618 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 CTNNAL1Q9UBT7 734 aa15.35■□□□□ 0.05
ERCC3-203ENST00000445889 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-203ENST00000445889 CCT8L1PA6NM43 557 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 PAEPP09466 180 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 VCAM1P19320 739 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 ANKRD42Q8N9B4 389 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 CRYGNQ8WXF5 182 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 CDC25CP30307 473 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 MYL7Q01449 175 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 ICA1Q05084 483 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 TNIP1Q15025 636 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 C2CD6Q53TS8 623 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 DAB2IPQ5VWQ8 1189 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 RPUSD2Q8IZ73 545 aaKnown RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 KIF2BQ8N4N8 673 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 C1orf54Q8WWF1 131 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 ATXN2LQ8WWM7 1075 aaKnown RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 AGPAT3Q9NRZ7 376 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
ERCC3-203ENST00000445889 APEX2Q9UBZ4 518 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 AGAP1Q9UPQ3 857 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 FRMD4BQ9Y2L6 1034 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
ERCC3-203ENST00000445889 GOLGA8IPA6NC78 632 aa15.33■□□□□ 0.05
ERCC3-203ENST00000445889 GOLGA8JA6NMD2 632 aa15.33■□□□□ 0.05
ERCC3-203ENST00000445889 EYA4O95677 639 aa15.33■□□□□ 0.05
ERCC3-203ENST00000445889 ZKSCAN8Q15776 578 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms