RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GTPBP6O43824 516 aaPredicted RBP19.04■□□□□ 0.64
LIME1-202ENST00000444951 FAM13AO94988 1023 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 GUCY2CP25092 1073 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 WDR5P61964 334 aaKnown RBP19.04■□□□□ 0.64
LIME1-202ENST00000444951 DEFB103AP81534 67 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 TAP1Q03518 808 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 POSTNQ15063 836 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 SERINC5Q86VE9 423 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 RHPN2Q8IUC4 686 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 KSR1Q8IVT5 923 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 KIAA0319LQ8IZA0 1049 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 TCP11Q8WWU5 503 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 MAP7D2Q96T17 732 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 C7orf25Q9BPX7 421 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 KCND2Q9NZV8 630 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 HOOK1Q9UJC3 728 aaKnown RBP19.04■□□□□ 0.64
LIME1-202ENST00000444951 COL4A4P53420 1690 aaPredicted RBP19.04■□□□□ 0.64
LIME1-202ENST00000444951 SMIM35A0A1B0GVV1 85 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 CXCL10P02778 98 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 CTSHP09668 335 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 THPOP40225 353 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 PTK7Q13308 1070 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 MBTPS1Q14703 1052 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 IER5Q5VY09 327 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 CCDC155Q8N6L0 562 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 PHOSPHO2Q8TCD6 241 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 ASAP3Q8TDY4 903 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 ATXN2LQ8WWM7 1075 aaKnown RBP19.03■□□□□ 0.64
LIME1-202ENST00000444951 PRPF31Q8WWY3 499 aaKnown RBP19.03■□□□□ 0.64
LIME1-202ENST00000444951 PSPC1Q8WXF1 523 aaKnown RBP19.03■□□□□ 0.64
LIME1-202ENST00000444951 DNAJC19Q96DA6 116 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 ASB2Q96Q27 587 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 NUP62CLQ9H1M0 184 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 CLSTN2Q9H4D0 955 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 PANK4Q9NVE7 773 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 GINS2Q9Y248 185 aa19.03■□□□□ 0.64
LIME1-202ENST00000444951 TCF20Q9UGU0 1960 aaKnown RBP19.02■□□□□ 0.64
LIME1-202ENST00000444951 NCOR1O75376 2440 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 EVPLQ92817 2033 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 GAS2O43903 313 aaKnown RBP19.02■□□□□ 0.64
LIME1-202ENST00000444951 BAIAP3O94812 1187 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 SRGAP2CP0DJJ0 459 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 ARL2P36404 184 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 MAPK7Q13164 816 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 ZNF618Q5T7W0 954 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
LIME1-202ENST00000444951 TAF2Q6P1X5 1199 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 RSPH3Q86UC2 560 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 DAW1Q8N136 415 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 LINC01465Q8N7H1 131 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 ARNTL2Q8WYA1 636 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 BSNDQ8WZ55 320 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 KIFAP3Q92845 792 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 NLRP4Q96MN2 994 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 TIPINQ9BVW5 301 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 TBC1D7Q9P0N9 293 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 ODF2LQ9ULJ1 636 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 MTCH2Q9Y6C9 303 aa19.02■□□□□ 0.64
LIME1-202ENST00000444951 CCDC169A6NNP5 214 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 RPN1P04843 607 aaKnown RBP19.01■□□□□ 0.63
LIME1-202ENST00000444951 GLRA2P23416 452 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 PEX3P56589 373 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 LAMTOR4Q0VGL1 99 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 DPYDQ12882 1025 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 KIZQ2M2Z5 673 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 CCDC65Q8IXS2 484 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 IFT74Q96LB3 600 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
LIME1-202ENST00000444951 LRRIQ4A6NIV6 560 aa19■□□□□ 0.63
LIME1-202ENST00000444951 TLL1O43897 1013 aa19■□□□□ 0.63
LIME1-202ENST00000444951 TRAK2O60296 914 aa19■□□□□ 0.63
LIME1-202ENST00000444951 SMC2O95347 1197 aa19■□□□□ 0.63
LIME1-202ENST00000444951 NLRP11P59045 1033 aaKnown RBP19■□□□□ 0.63
LIME1-202ENST00000444951 MRPS5P82675 430 aaKnown RBP19■□□□□ 0.63
LIME1-202ENST00000444951 TFF2Q03403 129 aa19■□□□□ 0.63
LIME1-202ENST00000444951 HERC4Q5GLZ8 1057 aaPredicted RBP19■□□□□ 0.63
LIME1-202ENST00000444951 ODR4Q5SWX8 454 aa19■□□□□ 0.63
LIME1-202ENST00000444951 CNKSR3Q6P9H4 555 aa19■□□□□ 0.63
LIME1-202ENST00000444951 SFR1Q86XK3 245 aa19■□□□□ 0.63
LIME1-202ENST00000444951 NLRP7Q8WX94 980 aa19■□□□□ 0.63
LIME1-202ENST00000444951 HPS3Q969F9 1004 aa19■□□□□ 0.63
LIME1-202ENST00000444951 SMARCE1Q969G3 411 aa19■□□□□ 0.63
LIME1-202ENST00000444951 OSBPL7Q9BZF2 842 aa19■□□□□ 0.63
LIME1-202ENST00000444951 PARVGQ9HBI0 331 aa19■□□□□ 0.63
LIME1-202ENST00000444951 M0QZ92 97 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 PLS3P13797 630 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 KCNJ6P48051 423 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 MRPS6P82932 125 aaKnown RBP18.99■□□□□ 0.63
LIME1-202ENST00000444951 COASYQ13057 564 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 DMP1Q13316 513 aaPredicted RBP18.99■□□□□ 0.63
LIME1-202ENST00000444951 CAPSQ13938 189 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 MXD4Q14582 209 aaPredicted RBP18.99■□□□□ 0.63
LIME1-202ENST00000444951 KLHL40Q2TBA0 621 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 SKOR2Q2VWA4 1001 aaPredicted RBP18.99■□□□□ 0.63
LIME1-202ENST00000444951 ISM2Q6H9L7 571 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 UNC13DQ70J99 1090 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 RNF149Q8NC42 400 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms