RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PRMT7Q9NVM4 692 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-208ENST00000444533 PIN4Q9Y237 131 aaKnown RBP15.57■□□□□ 0.08
SSBP3-208ENST00000444533 A0A1B0GVL5 298 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 K7ERI5 159 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 PFKFB1P16118 471 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 STRN3Q13033 797 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
SSBP3-208ENST00000444533 DYMQ7RTS9 669 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 IFNLR1Q8IU57 520 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-208ENST00000444533 DDX12PQ92771 950 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 CHAMP1Q96JM3 812 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 ADAM2Q99965 735 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 REEP2Q9BRK0 252 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 MSRAQ9UJ68 235 aa15.56■□□□□ 0.08
SSBP3-208ENST00000444533 HOOK1Q9UJC3 728 aaKnown RBP15.56■□□□□ 0.08
SSBP3-208ENST00000444533 GOLGA6L22H0YM25 854 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 IDEP14735 1019 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 GAP43P17677 238 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 LIG1P18858 919 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 IBSPP21815 317 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 FGFR4P22455 802 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 NPTX2P47972 431 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 RAB30Q15771 203 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 LRIT3Q3SXY7 679 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 KANK3Q6NY19 840 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 NOTUMQ6P988 496 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 SLC24A5Q71RS6 500 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 CCDC65Q8IXS2 484 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 HACE1Q8IYU2 909 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 CCDC47Q96A33 483 aaKnown RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 TRIM6Q9C030 488 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 CXXC1Q9P0U4 656 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-208ENST00000444533 SEL1LQ9UBV2 794 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 PCDHB7Q9Y5E2 793 aa15.55■□□□□ 0.08
SSBP3-208ENST00000444533 A0A087X0B3 334 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 SFI1A8K8P3 1242 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 ENPP3O14638 875 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 UPP2O95045 317 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 PRKCBP05771 671 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 SLFN14P0C7P3 912 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 RAB27AP51159 221 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 SMAD3P84022 425 aaKnown RBP15.54■□□□□ 0.08
SSBP3-208ENST00000444533 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-208ENST00000444533 PRPF4BQ13523 1007 aaKnown RBP15.54■□□□□ 0.08
SSBP3-208ENST00000444533 GIT2Q14161 759 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 NAALADL2Q58DX5 795 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 ARSHQ5FYA8 562 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 RASIP1Q5U651 963 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 CDCA2Q69YH5 1023 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-208ENST00000444533 STXBP4Q6ZWJ1 553 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 FAM178BQ8IXR5 827 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 CNNM3Q8NE01 707 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 CCDC51Q96ER9 411 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 ADPGKQ9BRR6 497 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 POLD4Q9HCU8 107 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 RGS18Q9NS28 235 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 AGPAT5Q9NUQ2 364 aa15.54■□□□□ 0.08
SSBP3-208ENST00000444533 TCHHQ07283 1943 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 K7ENM7 598 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 SLC16A4O15374 487 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 HOXA2O43364 376 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 TLL1O43897 1013 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 TRAK2O60296 914 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 MYL1P05976 194 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 SARSP49591 514 aaKnown RBP15.53■□□□□ 0.08
SSBP3-208ENST00000444533 NDUFA8P51970 172 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 ASIC1P78348 528 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 MBTD1Q05BQ5 628 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 E2F4Q16254 413 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 HABP4Q5JVS0 413 aaKnown RBP15.53■□□□□ 0.08
SSBP3-208ENST00000444533 NPAS4Q8IUM7 802 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 HERC6Q8IVU3 1022 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 ABI1Q8IZP0 508 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 BSNDQ8WZ55 320 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 VWCEQ96DN2 955 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 YME1L1Q96TA2 773 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 NTPCRQ9BSD7 190 aaKnown RBP15.53■□□□□ 0.08
SSBP3-208ENST00000444533 OSBPL7Q9BZF2 842 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 TMEM134Q9H6X4 195 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 PANK4Q9NVE7 773 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 INSL6Q9Y581 213 aa15.53■□□□□ 0.08
SSBP3-208ENST00000444533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-208ENST00000444533 MYMKA6NI61 221 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 ACKR2O00590 384 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 N4BP3O15049 544 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 AFMP43652 599 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 DEFB103AP81534 67 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 MAPK7Q13164 816 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 FAM187BQ17R55 369 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 HERC4Q5GLZ8 1057 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-208ENST00000444533 FAM117BQ6P1L5 589 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms