RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 STAM2O75886 525 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 SPATA31D3P0C874 917 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 MTHFD1LQ6UB35 978 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 SPATA31D4Q6ZUB0 917 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 LMAN1LQ9HAT1 526 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 PIEZO2Q9H5I5 2752 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 ADH1AP07327 375 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 GALTP07902 379 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 MPLP40238 635 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 ZNF605Q86T29 641 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 AMNQ9BXJ7 453 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 MTCL1Q9Y4B5 1905 aaKnown RBP16.35■□□□□ 0.21
SYNCRIP-203ENST00000444272 K7ESF4 209 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 ARHGAP6O43182 974 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 CSRP1P21291 193 aaKnown RBP16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 RAP1GAPP47736 663 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 AK2P54819 239 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 KIZQ2M2Z5 673 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 PRKD2Q9BZL6 878 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 ADAMTS10Q9H324 1103 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 NRDE2Q9H7Z3 1164 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
SYNCRIP-203ENST00000444272 EVPLQ92817 2033 aa16.33■□□□□ 0.21
SYNCRIP-203ENST00000444272 CARNS1A5YM72 827 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 TEX28O15482 410 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 PAPLNO95428 1278 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 POLR2MP0CAP2 368 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 GAS6Q14393 721 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 FGF13Q92913 245 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 PCYT2Q99447 389 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 ZDHHC7Q9NXF8 308 aa16.33■□□□□ 0.2
SYNCRIP-203ENST00000444272 ATP9AO75110 1047 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 F5P12259 2224 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 SLC11A1P49279 550 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 FGD1P98174 961 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 SCAPQ12770 1279 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 ZNF598Q86UK7 904 aaKnown RBP16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 KIAA0319LQ8IZA0 1049 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 SAMD3Q8N6K7 520 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 TTC14Q96N46 770 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 ASXL3Q9C0F0 2248 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 DNAJB4Q9UDY4 337 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 PCDHGA5Q9Y5G8 931 aa16.32■□□□□ 0.2
SYNCRIP-203ENST00000444272 SHROOM3Q8TF72 1996 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 MAN2B1O00754 1011 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 URODP06132 367 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 FGRP09769 529 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 KLRC1P26715 233 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 HOXC13P31276 330 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 NTHL1P78549 312 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 GRASPQ7Z6J2 395 aaPredicted RBP16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 SLC39A7Q92504 469 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 RPS6KC1Q96S38 1066 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 SPTA1P02549 2419 aa16.31■□□□□ 0.2
SYNCRIP-203ENST00000444272 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 KCNA2P16389 499 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 WDR5BQ86VZ2 330 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 PALB2Q86YC2 1186 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 SPEM1Q8N4L4 309 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 PLEKHA4Q9H4M7 779 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 AZI2Q9H6S1 392 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
SYNCRIP-203ENST00000444272 J3QKU1 62 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 FOXP2O15409 715 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 PAPSS2O95340 614 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 RNASELQ05823 741 aaKnown RBP16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 FAM3CQ92520 227 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 UBL7Q96S82 380 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 PLA2G2FQ9BZM2 168 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 INPP5FQ9Y2H2 1132 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 ACACAQ13085 2346 aa16.29■□□□□ 0.2
SYNCRIP-203ENST00000444272 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 LNP1A1A4G5 178 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 B4GALT3O60512 393 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 RPP40O75818 363 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms